Actinomarinicola tropica: GH723_06820
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Entry
GH723_06820 CDS
T06914
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
atq
Actinomarinicola tropica
Pathway
atq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
atq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GH723_06820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atq03400
]
GH723_06820
Enzymes [BR:
atq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GH723_06820
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GH723_06820
DNA repair and recombination proteins [BR:
atq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GH723_06820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
DUF5363
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
QGG94843
UniProt:
A0A5Q2RGJ8
LinkDB
All DBs
Position
1378062..1378901
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AA seq
279 aa
AA seq
DB search
MRELPEVETIRRALDKEAGGKKVKTADVAAPMSALPHHPNKKHLAGKLEGAKITSVTRRG
LALLLQLDTGDVAVVQLGTGGWIVKAVPKDPVGKETLITLAFTQGGQVRINDTSGTATVS
VVSADDLDAQFPELTTLGLDPVETPVSWTLFAEMLRGRKSKLKAFLTDQTVIAGLGDLYA
DEILFAAGLRPDRIAGSLTTQEIRRLYRSVVETLHDAIKYRGTSLDGDEFVDLYGKPGEY
TDHLKVFALEKEACRRCRVPVVKVRSGSTVTYMCEQCQV
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagctgccggaggtcgagaccatccgccgcgccctcgacaaggaggcgggtggg
aagaaggtgaagaccgccgacgtcgccgcgccgatgtcggcgctgccgcaccacccgaac
aagaagcacctggccggcaagctggagggggcgaagatcacgtcggtcacccggcgaggc
ctggcgctgctcctccaactcgacaccggtgacgtcgccgtggtccagctcggcaccggc
gggtggatcgtgaaggcggtcccgaaggacccggtcggcaaggagacgctgatcaccctg
gccttcacccagggcgggcaggtgcggatcaacgacacgtccggcaccgccaccgtgtcg
gtcgtgtcggccgacgacctcgacgcgcagttccccgagctcaccaccctcggcctcgac
ccggtcgagacgcccgtgtcgtggaccctcttcgccgagatgctccgaggccgcaagtcg
aagctgaaggcgttcctcaccgaccagaccgtgatcgcggggctcggcgacctgtacgcc
gacgagatcctcttcgccgccggtctgcggcccgaccgcatcgccgggtcgctgaccacc
caggagatccggcgtctctaccgctcggtcgtcgagaccctccacgacgcgatcaagtac
cgcggcacgtcgctcgacggtgacgagttcgtcgacctctacggcaagcccggtgagtac
accgaccacctcaaggtcttcgccctcgagaaggaggcgtgccgccgctgccgcgtgccc
gtggtcaaggtgcgctcggggtcgaccgtcacctacatgtgcgagcagtgccaggtctga
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