Amborella trichopoda: 105420316
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Entry
105420316 CDS
T02990
Name
(RefSeq) transcription initiation factor TFIID subunit 10-like
KO
K03134
transcription initiation factor TFIID subunit 10
Organism
atr
Amborella trichopoda
Pathway
atr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105420316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
105420316
03036 Chromosome and associated proteins [BR:
atr03036
]
105420316
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105420316
Coactivators
SAGA/TFTC/STAGA complex
105420316
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105420316
STAGA complex
105420316
TFTC complex
105420316
SAGA complex
105420316
SLIK complex
105420316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF10
CBFD_NFYB_HMF
TAF4
LEM
GAT
DUF2452
Motif
Other DBs
NCBI-GeneID:
105420316
NCBI-ProteinID:
XP_011621813
LinkDB
All DBs
Position
Unknown
AA seq
127 aa
AA seq
DB search
MNSSDPNHDDEAALIEFLSSLMDYTPTIPDELAEHYLGKSGFQCPDIRVTRLVALATQKF
IAEIANDALQLCKARQSAVVKDKRDKLQKDKRLILTNDDLSKALHEYGVNMKRQEYFAEN
PSTGMEP
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgaattcttcggatccaaaccacgacgatgaggcagctctcattgaattcctctcctct
ctcatggattacacccccactataccggacgaattggcggagcattatcttggaaagagt
ggtttccagtgcccagacattcgagtaactagattggtggcactcgcaacccaaaaattc
attgcagaaattgcgaatgatgctcttcagctgtgcaaggctaggcaatcagcagttgtt
aaggataagagagataaactgcaaaaggataagcgcctcattttgacaaacgatgatctc
tctaaggcattacatgaatatggggtgaatatgaagcgccaagaatattttgctgagaac
ccatcgactggaatggaaccttaa
DBGET
integrated database retrieval system
