Amborella trichopoda: 105420918
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Entry
105420918 CDS
T02990
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
105420918
04121 Ubiquitin system [BR:
atr04121
]
105420918
Enzymes [BR:
atr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105420918
Membrane trafficking [BR:
atr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
105420918
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105420918
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
zf-RING_5
Zf_IFT144_1st
zf-Nse
Baculo_IE-1
HypA
Motif
Other DBs
NCBI-GeneID:
105420918
NCBI-ProteinID:
XP_006847820
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MSTTANAAAPPSLSFWCHQCSRTVYLSPPPSGSADLVCPNCHGGFLEELESPPPSIPNPF
LNFFEPFSGHFSGRERIFAPPSRPISNPDDVFAVHDQSDPMVFNPLIFLQDYLQTLVQGR
PNFQVVFETSDNAAPAGFRLNDYFVGPGLEQLIQHLAENDPNRYGTPPASESAIDSLPEV
RVSSELLNSDTSQCAVCKDAFEEGSFAKQLPCKHIYHGDCILPWLELHNSCPVCRYELPT
DDQDYERRNQGEGRPNQGEGRRNPAGQPESGGDSGEGSAGDGGSGGQQGQGRRFRISIPW
RLNALVAGGGSENSGGESGRAGEGGGENSGGQGERGGVVGGSGSGSGGDNRGDGAGDSRL
RQEDLD
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgaccgccaacgcggcggcccccccctccctatccttctggtgccaccaatgc
tcccgcacggtctatctctctcctcccccttctggctctgccgatcttgtttgccctaac
tgtcatggcggcttcttggaagagctcgaatcccctcctccttctatccctaaccccttc
ctcaacttctttgagccattttctggtcacttttccggtcgcgagcgcatttttgccccc
ccttctcggcccatcagcaacccggatgacgtctttgccgtccacgaccagagcgatccc
atggtcttcaaccctctaatcttccttcaagattacctccaaacccttgtgcaggggagg
ccgaacttccaagttgtctttgagacctcggataatgcggcccctgccggttttcggcta
aatgactattttgttggccccggcctagagcagctgatccagcacctcgctgagaacgat
cccaaccgctacgggacgcccccagcatcagaatcagccatcgattcgctcccagaagtt
agggtttcctctgagctcttgaattctgatacgtcccagtgtgcggtatgcaaggatgca
tttgaggagggttcgtttgccaagcagttgccttgcaaacacatataccacggcgattgt
attttgccatggctcgagcttcataactcttgcccggtttgcaggtacgagctgccaaca
gatgaccaggactatgaacgccgaaatcagggtgaggggcgtccgaatcagggtgagggg
cgccggaatccggcagggcagccagaatcaggcggagattctggagaagggtcagccggc
gatggtggtagtggcggccagcagggccaggggaggaggtttaggatctcgatcccttgg
cgtttgaatgctttggtggctggaggtgggagcgaaaatagtggtggtgagagtggtagg
gcgggtgaggggggtggtgagaatagcgggggccagggcgaaagaggtggggttgtgggt
gggagtgggagtgggagtggaggggacaatagaggggatggggctggtgatagccggttg
aggcaggaagatcttgactga
DBGET
integrated database retrieval system
