Amborella trichopoda: 105421177
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Entry
105421177 CDS
T02990
Name
(RefSeq) organic cation/carnitine transporter 4-like isoform X1
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atr02000
]
105421177
Transporters [BR:
atr02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
105421177
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
105421177
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
Motif
Other DBs
NCBI-GeneID:
105421177
NCBI-ProteinID:
XP_011625885
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MALPAGDFEKMGVDVMLQRFSGEFGLWHLRHLVLVSLAWLPNAFHTMVMIFADHEPAWRC
TASCSGSLMSVCNLEPGSWEWVGGNGASIVSSFGLVCGDKYKIGLVQSAFFAGSLIGAGI
FGHLSDSLLGRKGALTVVCVMNALFGFCTAVAPSYWVYFLLRFLTGISAGGVGLAAFVLA
TEPAGPTKRGAVGMSTFYFYSVGLALLSCTAYFFRQWRSLYVVTSLPSLLYIVAALPFIS
ESPRWLLVRGRISEALTVMGDMAKTNGNHLPNGVSLALDNQLLDYDNVSENRVISGSLFD
VIKSPLTRIRLILLLLINLACSIGYYGLTLNAVNIGTDAYLNVFLNGVFEIPAYIFTTLI
LGRCGRRTLVMGTMGISGTFCLLGSTMKGDGLFEGIRMFCGFMGIFGVAGTFNLLFIYAS
ELFPTVVRNAALGCVTQGGQLGAILAPMVVVMGAELAFAVIGLCGVLGAILSFYLPETLN
KPLYDTMSGLESAESDGVP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcattgccagccggagattttgaaaagatgggtgtcgatgtgatgctgcagagattt
tccggcgagtttgggctttggcacttgcggcacctagtgctagtcagcttggcatggctt
cccaatgccttccacaccatggtcatgatttttgccgatcacgagccggcctggaggtgt
accgcatcttgctctggttcattgatgtctgtctgcaacttggagcccggctcatgggag
tgggtgggaggcaatggcgcttccatagtttcaagttttgggttggtttgcggtgacaaa
tacaaaatcggcttggttcaatctgctttctttgccggaagcctcataggtgcagggata
tttgggcatctctctgattctttattgggtcgaaaaggggcgctaacggtcgtatgtgta
atgaatgctctcttcggcttttgcacagcagttgcaccaagttattgggtctacttcctc
ctccgcttcctcactggtattagtgctggtggtgtcggcctcgccgcctttgtcttggct
actgaacccgcaggcccgaccaagcggggagccgttggaatgtcaacattctatttctac
tctgttggacttgccttgctttcttgcactgcctactttttccggcaatggcgctccctc
tatgtagttacttccttgccctcgctactctacattgtggctgccctccccttcatctct
gagtcccctcggtggctcctggtgcgtggtcgcatctcggaagccctgactgtcatggga
gatatggcaaaaaccaatggcaaccacctccctaacggagtctctcttgcccttgataat
caattactggattacgataatgtgtcggaaaatcgagtgatctctggctccctctttgat
gtaatcaaatctccattaacccgcattcgcctgatcttattgttgctgataaacctagca
tgctccattgggtactacggccttactctaaatgccgtaaacatcgggacggacgcctat
ttgaatgtctttttgaacggagtctttgagattccggcatatatctttactacattgatc
ttggggaggtgtgggaggaggacactggttatggggaccatgggaataagtgggactttc
tgtttactaggaagtacaatgaagggggatggattatttgaagggattaggatgttttgt
gggtttatggggatattcggggtggccggaacattcaatctgttgtttatttatgcatcg
gaattgtttccgacggtggtgcggaatgcagcattagggtgcgtgacacaggggggccag
ttgggggcgattttggcaccaatggtggttgtgatgggtgcggagttggcctttgcagtg
atcggtttgtgtggggttctaggggcaatactctcattttacctgccagagaccttgaac
aagcctctgtatgatacaatgtctggtttagaaagtgcagaaagtgatggggttccttaa
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