Amborella trichopoda: 105421188
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Entry
105421188 CDS
T02990
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g41080
Organism
atr
Amborella trichopoda
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPR_2
DYW_deaminase
PPR
PPR_1
PPR_3
E_motif
PPR_long
Eplus_motif
Motif
Other DBs
NCBI-GeneID:
105421188
NCBI-ProteinID:
XP_011625904
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MYNCSILNKTRTHSLKAFLHSLSTSSKNPTKFRLDFITLCSEGQLKEALSKFQPKTGSDQ
TIFSLQKNPTSFSLLLQGCVPLQSIALGKQLHSIIVTGGLSSDRFLCNHLLNMYTKCQSL
DFALQVFERMGSPNTMSFNILINGFSQKGELCLSLKLFDKMPEKNLASWNAVISGLTQHG
FHENGLHYFSEMRNSGLIPDQFTLGSALKGCSGIRALKLGQQIHGNTVKLGFQSNLFVGS
SLSHMYMKCGVLDEGERVFRAMPIHNVVSCNTIIAGQAQNGQSDRALDYFKMMKASGLMP
DRVTFVSVISSCAELATLGQGQQAHCQATKAGVDLALSVRSSLVSMYSKCGCLADSYQCF
IEVANEMDTVLWSSMIAAYGFHGYGREAIYLFEKMVREGIEPNEITFLGLFFACSHSGLK
DQGLEYFRLMSEKHGLEPKLEHYTCMVDLLGRLGFLKEAESLIKSMPFKPDPVILKTLLS
SCKIHGDAEVAKRVAEDLLLMEPNDSAPYVLISNIHAASKRWEDVTRVRKAMRDSKVKKE
PGISWIEVKNQVYKFWMGDKSHPQWREIHRFLKKLIVEIKEHGYEPDTSSVLHDMGEEEK
EDSLAHHSEKLAVAFGLMNSPQGCVIRVMKNLRVCIDCHVAIKLISKITMREIVVRDASR
FHHFREGSCTCGDYW
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtataattgcagcatcctcaacaaaaccaggacccattctctaaaagccttcctccat
tctctctctacctcttccaaaaaccccaccaaatttagactagatttcatcaccctctgt
tcagaaggccagctcaaggaggccctctcaaaattccaacctaaaaccgggtccgaccaa
acaattttctctctccaaaaaaatccaacttctttctctctcctccttcaaggatgtgta
ccattacagtccattgctttaggaaaacagctccactccattatagtaacaggtgggctc
tcttcggatcgatttctctgcaaccaccttctgaatatgtatacaaaatgccaaagctta
gactttgcactccaagtatttgagagaatgggaagcccgaacaccatgtctttcaatata
ttaatcaatgggttttcacagaaaggagaactctgtctctctctaaaacttttcgacaaa
atgcctgagaaaaaccttgcttcgtggaatgcggtgatttcaggattaactcaacatgga
ttccatgagaatggccttcattacttctcagaaatgagaaattcaggcttaatcccagac
cagttcactctaggaagtgctttaaagggatgctcaggcataagagctctgaaacttggg
caacaaatccatggaaacacagtaaagctcgggtttcaatccaatctatttgtgggttct
tctctttctcacatgtacatgaaatgtggggtcttagatgaaggagaaagagtgtttaga
gccatgcctatccataatgtggtctcttgtaacactataattgcaggtcaagctcaaaat
gggcagtctgatagggccttagactacttcaaaatgatgaaagcttcgggcctgatgcct
gatagggtcacttttgtgagtgttataagctcttgtgcagagctagcaactcttgggcaa
ggccagcaagctcattgccaagccactaaagctggggtagacttggctctctctgtgagg
agctccctggttagcatgtattcaaagtgtgggtgtttggctgattcttaccagtgtttt
atagaggttgcaaacgaaatggatactgttctttggagctccatgattgcagcttatggg
tttcatggatatggaagagaggccatttacctctttgagaagatggtcagagaagggatc
gagcccaatgagattacctttcttggtttgttttttgcttgcagccacagtgggctcaag
gaccagggcttggagtatttcaggcttatgagtgagaagcatgggttggagccaaaattg
gagcactacacttgtatggttgatcttctaggaaggttgggtttcttaaaagaagctgaa
tctctgatcaaatcaatgccattcaaaccagaccccgttattttgaagactttgctttca
tcctgcaaaattcatggggatgcagaggtcgcaaagagagttgcagaggaccttctatta
atggaacccaatgactctgcaccttatgttttaatctcaaatatacatgcggcatctaag
agatgggaggatgttactagagtgagaaaagccatgagagactccaaggtgaaaaaagag
cctggaattagctggattgaggtgaaaaaccaggtttataagttttggatgggagataaa
tcacacccgcaatggagagagattcacaggtttttgaagaaactcatagtggagatcaaa
gaacatgggtatgagcctgatacaagctctgtgctccatgacatgggtgaggaagagaag
gaggattctttagctcatcatagtgagaagcttgctgttgcgtttggcctcatgaattca
cctcaagggtgtgttatcagggttatgaagaacctgagagtatgtatcgattgccatgtt
gcgatcaagcttatctctaagatcaccatgagagagattgtagtaagagatgcgagccgg
tttcatcattttagagagggaagctgcacatgtggagactactggtga
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