Amborella trichopoda: 18421603
Help
Entry
18421603 CDS
T02990
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
atr
Amborella trichopoda
Pathway
atr00906
Carotenoid biosynthesis
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
Module
atr_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
18421603
Enzymes [BR:
atr01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
18421603
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
GDI
Pyr_redox_2
HI0933_like
GIDA
Thi4
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
18421603
NCBI-ProteinID:
XP_020531364
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MILSSSNLTSPNFKQNPVSECRFWLENPTFRRLIPLGYRGFRHKTVNPVLSVANKQNPLS
EFSILGSQTRGSSPRNGNLRFGVYERGCLMNCKAVVAEKEVAKNGFWGVEREGYDAIVIG
SGMGGLVAATQLAVKGARVLVLEKYVIPGGSCGYYERAGYTFDVGSSVMFGFSDKGNLNL
VTQALAAVGKEMELIPDPSTVHFHLPDNLSIRVHREYGDFITELTGSFPHEKEGIYKFYS
ECWKIFNALNALELKSLEEPIYLFGQFFRKPLECLTLAYYLPQNAGDIARKHIKDPRLLS
FIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVGGVGGIAKSLAEGLVNNGGEIL
YKANVTSIILDNGKAVGVRLSDGREFFAKKIISNATRWSQTQNVLQAIDGLYCVGDSCFP
GQGVIAVAFSGIMCAHRVASDIGLEKKSLVLDAALLRLLGWLRSIA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgattctctcctcttcaaacctgacttccccaaatttcaagcaaaacccagtttcagaa
tgccgattctggttggaaaaccctacttttaggcgcttaattcccctcgggtacagaggt
ttcaggcacaaaactgtaaatccagtgctttcagtggccaacaagcaaaatccactctct
gaattttccattttaggctcccaaaccagaggttcgagtcccaggaatgggaatctacgt
tttggggtttatgagcgtgggtgtttgatgaattgtaaagctgtagttgcagagaaagaa
gtagcgaaaaatgggttttggggggttgaaagggaaggttatgacgccatagttataggt
tcaggtatgggtggtctggttgctgccactcagttggctgttaaaggagctagggttttg
gttttggagaaatatgtgatccctggtgggagctgtggttattacgagagagctggttat
acattcgatgttggttcttcagtaatgtttgggttcagtgacaaggggaacctaaacttg
gtgacccaagccttggcagctgtggggaaagagatggagttaataccggatccatccact
gttcatttccatttaccagacaatctctccattcgcgtgcacagagagtacggcgacttc
attaccgaactcacagggagtttccctcatgaaaaagaagggatctataaattttacagt
gagtgttggaagatctttaatgctttgaatgcattggagctgaaatcactcgaggagcca
atttaccttttcggtcaattttttcggaagccattagaatgcttaactcttgcttattat
ctgcctcagaatgctggggacattgctcgaaaacacataaaagatccccgtttactgtct
ttcattgatgcagagtgttttattgtcagcacggtgaatgcccttcagaccccaatgatt
aatgcaagcatggttttgtgtgaccgacattttggtggaatcaattacccagttggtggt
gtaggggggatagcaaaatctttggcggaaggccttgttaacaatggtggggaaattctg
tacaaggccaatgtgactagcattatacttgataatggaaaggctgtaggggtgaggctt
tcagatggaagagagttttttgccaaaaagataatatcaaatgcaaccagatggtcacaa
actcaaaatgtgttgcaggcaatcgatgggctttactgtgttggcgatagctgctttcct
ggacaaggggtcatagcagtagcattttctggcatcatgtgtgcgcatcgagtggcttca
gatattggacttgagaagaagtctctggtgctggacgctgccttgctgcgattgcttggc
tggttaagatcaatagcctga
DBGET
integrated database retrieval system
