Amborella trichopoda: 18421616
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Entry
18421616 CDS
T02990
Name
(RefSeq) nuclear pore complex protein NUP1 isoform X1
Organism
atr
Amborella trichopoda
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF2981
Motif
Other DBs
NCBI-GeneID:
18421616
NCBI-ProteinID:
XP_006826428
UniProt:
W1NEY0
LinkDB
All DBs
Position
Unknown
AA seq
1329 aa
AA seq
DB search
MVTGAGAYEGGAGGKIRRKPPRKPSTPYDRPLSLSGLRNPSDEGRNGWLSKLVDPASKII
ANGAAKLFSSVFRKRLGPPPANSDVRPEARNEPIKDGLDNPLLVEPEQVTDQREKQDDAL
DSTGFNELEELLKQKTFTREEFDRLSELLRSRTVDSSSDESKRVGLNTLEATVNPERQSN
LEIVVEEGTNPWQSSNPGNVVTPAVHSSILSQIPDDVGASPAEIARAYMGVRPSRASPSS
FGLRSHPLRRDVSMIRSTTYAPKSVDLSLTSKSSVRFSGFPGLAEDGYLTPTRGRSTLYN
AIRTPYSRPVGLTDQEGSANGYAGPSTPSYWTTANGSSGGRQVLKRRSSVMENGFGSVGT
IRRIRQKSNLMVLSKAPNASVPASSPLPLLLPGSDADQNSFVPPKLDVPESSTSKSQADG
NGEERGVVMVPQQTRETVKRIFAGLDKMFPSPKDKSSELRLATGAPTKLTPDMLQGQAKR
SMEIVDFPKLPNLHGNCLDAHNGTQSHGPTVDKRKEMGVANGPLKIVEGRREGTESPDTR
NSNVAATNAISGVVSVDTASQAISTAKPSRKRQGFQMSAPEVSLDPDEGIYGGGQMPSPK
KQGPPGSETFALQMPSGSKKEASLREPFTLPKPHGSVQNASTSEAVPTPKPLVPSAPVEK
PALSSTQLASLDTKATSGPIVSQNNLGFTFPVTPSSLYSEAPPTPTTSPFSMLDKPVQPK
EKASSQFGFGSTSTAKVPAFSIPSSPAISDSSSLKFGAGTSVLDGSSFKFGAGAVSSVSL
GSNMKFGEKTTPSIPDGPTLKFGGRTSPLMSDATNLKFGAGTVPSVSDGTTEKFGAGTGT
TALDGSTPKFGVVTVSAVSDGSNVQFGGVSGSGLKFGTGLERNGQTSGSNAAVATSSVSP
PVNTGSVEPNQTTQALGEPLKPSENAPTTSGTKPEQSPTPLNSLFSNSSPTPIDQTSSVP
SFSTFSSSFPSPSFQFGSSSTISSTSTTMASLQPTTTESKPSPLSGATGASFLAATNSSF
GLFGQSAPNSGVFGLTNSAAISQTSPQSGSTAVPLSSSSPFQFGSASSQFGSSGSLFGSS
SPSTAGNLSASGSGGATATSIGTGSAPPPFNFGFNASSSSSGVAAFSSSSSSPAFQSFGS
STAPLFGSGFGTSASTGFSFGGSSASMSSHFSGASSAPTSTPFTFVSTPSSGPVFPFTSS
AATQSPNPFLGQGFGASASPMNNSGNNSNNNDQMNVEDSMAEDTVQTMQPSQAMISAFGS
PSPSSSFVFGAPSATPTGGPAPFQFAATPSPIGAGGSLEYAGGSFSVGAGGDKSVRKIIR
ARRDKVRKK
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggttacgggcgcaggggcatatgaaggtggagcaggggggaagatacgaagaaagcct
ccgagaaagccgagtactccttatgatcgtcctctctctctaagtggtctcagaaaccct
tcagacgaggggagaaatggatggttgtcgaagcttgtggatcccgcttcaaagatcatt
gctaatggtgctgcaaagctattttcttcagttttcaggaagcgacttggtcctccccct
gcgaattctgatgttagacctgaagctagaaacgagcctatcaaagatggtttagataat
cctttacttgtggaaccagagcaagttacagaccagcgggaaaaacaggatgatgctctt
gacagcactgggtttaatgaacttgaggagttgctaaagcagaagacgtttacaagggaa
gagtttgatcgcttgtcagagttactacgttcacgcactgttgattcttcttctgatgaa
agtaaaagggttgggctgaacacattagaggcaacagtgaatcctgaaaggcagagtaat
ttggaaatagttgtggaagaagggacaaatccctggcagagcagtaatcctggaaacgtg
gtgactcctgctgtccattcgagtatattatcacagatccctgatgatgtcggtgcatca
ccagcagaaattgcaagagcttatatgggtgtcaggccttcaagagcatcaccatcttcc
tttggtttacgaagtcaccctctgagaagagatgtatctatgataaggagcacaacatat
gccccgaaatcagttgacctgtcgctcacatcaaaatcatctgtacgcttttctggtttt
cctggacttgctgaagatggctatctgaccccaacccgtggtagatctaccctttataat
gcgatccgaacaccttattctagaccagttggtcttactgatcaagagggtagtgctaat
gggtatgcgggtccctcaactccatcttattggacaacagcaaatggttcttctgggggc
agacaggttctgaagaggaggagttctgttatggagaatggttttgggtcagttggaacc
atacgaaggatacgccagaagtctaacttgatggtgctatcgaaagcacccaatgcttca
gttcctgcaagtagtccacttcctctgctccttcctggttctgatgctgatcaaaactca
tttgtacctccaaagttagatgtgcctgaaagtagtacatccaaatcccaggctgatggg
aatggagaagagagaggggttgttatggttcctcagcaaaccagagagacagtgaaaaga
atatttgcagggcttgacaagatgtttccttctcctaaggacaagtcttctgaactaagg
ctggctactggagcacccactaagttgacccctgatatgttgcaagggcaggccaaaaga
agcatggagattgtagattttccaaaattacctaatttacacggcaattgtttggatgct
cacaatggtactcagtctcatggtcctactgttgataaaaggaaagagatgggtgttgca
aatggccctttgaagattgttgagggaagaagagaagggaccgaatctccggatacaaga
aactctaatgttgcagcaactaatgccatttctggtgtggtgagtgtagatacagcaagt
caggccatttctacagcaaaaccttcacggaagagacaaggattccaaatgagtgcacct
gaggtctcgctagacccagatgaaggtatctatggcggcggtcaaatgccctcacccaag
aagcagggacctccaggatctgaaacatttgcattgcagatgccatctggctcaaagaaa
gaagcttcccttcgtgaaccatttactttaccaaaaccacatggctcagtacaaaatgct
tccacttctgaagcagttcccaccccaaagcctttggtgccctcggcacctgttgaaaag
cctgccttgagctctacccagcttgcaagccttgacacaaaagctacttctgggcctatt
gtttctcaaaacaacttgggtttcactttccctgttactccttccagtctgtattcagaa
gcacctccaacacctactacctcaccattttcaatgctagataaaccagttcagcccaag
gaaaaagcttcctcccaatttggttttggttctacaagcactgccaaggttcctgctttc
tcgattccctcctcgcctgctatctcggatagttcgagtctgaaatttggtgcaggaaca
tctgttttggatggctcgagtttcaaatttggtgcaggagcagtatcttctgtttcacta
ggttccaatatgaaatttggtgagaaaacaacgccttctattccagatggtcccactctg
aaatttggggggagaacatctcctttgatgtcagatgctactaatctgaaatttggtgct
ggaacagtgccttctgtttcagatgggaccactgagaaatttggtgcaggaacaggaact
actgctctggatggttcgaccccaaaatttggtgtagtaacagtttctgctgtttcggat
ggttcgaatgtgcaatttggtggagtatcaggatctggtctgaaatttggtactggattg
gagaggaatggacagacttctggcagtaatgctgctgttgcaacatcatcagtatctcca
cctgtgaacacaggatcagtggagcccaatcaaacaactcaggcgcttggagaacccctg
aaaccctctgaaaatgcccccacgacctcaggcaccaagcctgagcaatccccaacacct
ctgaattccttattttctaactcttcgcctacccctattgatcagacatcttcagtgcca
tctttttcgaccttcagttcatcttttccgtcgccttcatttcagtttggttctagctcc
accatatcttccacctcaacaacaatggctagcctccagcccacgaccacggagtcaaag
ccttcaccattgagtggtgccactggggcctctttcctggctgctacaaactcttcattt
ggcttgtttggccaaagtgcacccaactcaggtgtctttggcttgactaactcagctgcc
atctcccaaacttcaccacagtctgggtccactgctgtccctctttcctcgagctcacct
ttccagtttggatccgcttcatctcagtttggctcaagtgggtccctgtttgggtcatct
tctccttctacagcagggaatttatctgcatccgggtctgggggtgccacagctactagt
attgggactgggtcggctcctcctccgtttaactttggcttcaatgcatcttcttcatca
agtggtgtggctgcgtttagttcgagcagtagcagccccgctttccagtcgtttgggtct
tctacagcaccactcttcggttctggttttggcacatcagcctctaccggcttctctttt
ggggggtcatcagcctcgatgagttcccacttttcaggggcctcatcggcgcccactagc
accccattcacctttgtttccacaccctcatcagggcctgtcttcccattcacatcttcg
gcagcgacccaatcccccaatccttttctggggcagggttttggtgcatcggcttcacca
atgaataatagtggcaataacagtaacaataatgatcagatgaatgttgaagatagcatg
gctgaagatacggtccaaacaatgcagccatcacaggccatgatctcggcatttgggtct
ccgagcccaagttcgagttttgtgtttggtgctccgagtgcaactcctacaggtggtcca
gcaccctttcagtttgcggctactccatctccaattggggctggagggagcttggagtat
gcaggtgggagtttctcagttggggctggaggtgacaagtctgttcgcaaaattattagg
gcaaggagagacaaagtcaggaaaaagtag
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integrated database retrieval system
