Amborella trichopoda: 18421828
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Entry
18421828 CDS
T02990
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
atr
Amborella trichopoda
Pathway
atr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18421828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18421828
03012 Translation factors [BR:
atr03012
]
18421828
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
18421828
Translation factors [BR:
atr03012
]
Eukaryotic type
Release factors
18421828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
THDPS_M
Motif
Other DBs
NCBI-GeneID:
18421828
NCBI-ProteinID:
XP_006826708
UniProt:
W1NFJ0
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MEEVREQPNSGPGNLVDGEPDDWSKEVDALEEDHQPSSADPSMDTPPPPQDNNVDIQSSL
QTLTLQDSEPKVQDMEMSAAGGQEVMQDPELTKKRHLNVVFIGHVDAGKSTTGGQILFLS
GMVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERIKGKTVEVGRAHFETETTRFTILD
APGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVV
VNKMDDPTVNWSKERYSEIESKMTPFLKSSGYNVKKDCQFLPLSGLLGSNMKTRISSDVC
NWWKGPCLFEALDSIEVPLRDPKGPLRIPIIDKFKDMGTVIMGKIESGSICEGDNLLIMP
NKAQVKVLAIFCDENRVRSAGPGENVRVRLSGIEEEDILAGFVLSSVAKPISAVFEFDAQ
LQILELLDNAIFTAGYKAILHIHSVVEECEIVELLQQIDPKTRKPMKKKVLFVKNGAIIV
CRIQVNNMICVEKFSDFPQLGRFTLRSEGKTIAVGKVIDLPSSGSSTSSAVV
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggtccgagagcagcccaactctggaccaggaaaccttgtggatggcgaacct
gatgactggagtaaggaagtagacgccttggaagaggaccaccaaccgtcttctgcagat
ccatccatggatacgccacctcctcctcaagataacaacgttgatattcagtcaagctta
cagacattaacattgcaggattctgaaccgaaagtgcaagatatggagatgtctgctgcg
ggagggcaggaagtgatgcaggacccagaactgaccaagaaacgacacctgaatgttgtt
ttcatcggccatgttgatgctggtaagtcaacaacgggagggcaaatacttttcctcagt
ggcatggttgatgatagaacaatccagaaatatgagaaagaggcgaaagacaagagtcga
gaaagttggtacatggcatacatcatggacacaaatgaagaagagcgtataaagggaaag
acagtggaggttggacgagcacattttgaaacagagactacacgatttacaattttggat
gctccgggacacaaaagttatgttccaaatatgataagtggtgcatcccaagcagatatt
ggagttctggtcatatcggcccgcaaaggtgagtttgaaactggatatgaaagaggaggg
caaacacgggagcatgttcaactcgctaagacattgggggtttctaaattgctagttgtt
gttaataagatggatgatccaacagtgaattggtccaaggaaaggtatagtgaaatagag
tcaaagatgacaccatttctaaaatcttcgggctacaacgtgaagaaagattgtcagttt
cttccattatctggtctattgggttctaacatgaaaactaggatatcaagtgatgtatgt
aactggtggaaaggtccgtgtttgtttgaggccttggattccattgaggttcctctacgg
gatcctaaaggtcctctcaggataccgataattgacaaatttaaagacatgggaacagta
attatgggcaaaattgagtctggcagcatctgtgagggtgataacttattgattatgccc
aataaggctcaagtcaaagtgcttgctattttttgtgatgaaaatagagtaagaagtgca
gggcctggtgaaaatgtccgtgttagattatcaggcattgaggaagaggatatattggcg
gggtttgtcctttcaagtgttgcgaagccaatatctgcagtttttgaattcgatgcccag
ttacaaatcttggagttgcttgacaatgctattttcactgcgggttacaaggcaatatta
cacattcattcagtggttgaagagtgtgagattgttgagctgttgcaacaaatcgatcca
aaaacaagaaagccgatgaaaaagaaagtactatttgtgaaaaatggagcaatcatagtt
tgccgtattcaggtgaataacatgatttgtgttgagaagttctctgattttccccagctt
gggaggtttacccttcgttctgaagggaaaactattgcggttggcaaagttattgatctt
cctagttcaggaagttcaacttcttctgcagttgtctag
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