Amborella trichopoda: 18422162
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Entry
18422162 CDS
T02990
Name
(RefSeq) RNA-binding protein 28 isoform X1
KO
K14573
nucleolar protein 4
Organism
atr
Amborella trichopoda
Pathway
atr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
18422162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atr03009
]
18422162
Ribosome biogenesis [BR:
atr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
18422162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
18422162
NCBI-ProteinID:
XP_006827040
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MGKKNLQKGEPNEQRDGDHCKSMVFVTNLSYSLSSSELEQAFSDVGPVRRCFLVKTKGSD
ENRGFGYVQFAVIEDAGRAIQLKNHSVMGGRKIRVEFAKQRVPRELRQSVASQDDDLQKV
HPKDSGGDLEDKSMSQKSKIPRKSEGSLQQMDASGNKLVNKGDGSEKQRVAKTVVFGGLD
GAEMAEEVFRCAGEIGSVCSIASLLKQDLEFHGLGKDGCTMDASSVLFTSVKEARAAVVS
LHQREIKGKCVWARQLGGEGSKTRKWRLIVRNLPFKITVKEIKDVFSKAGYVWDIFIPKN
TGEGGSSKGFAFVTYTCKQDAANAISMCNGHKIGKRPVAVDWALSKKIYDSAAVLDESKE
QGQQNDTYENNGDSASEDNISESFEAEPSEDLPEHSEDESSPREMPSEKEMDITKKVLEN
IIKCNANGNQALASKENYSLEASKDPSVARSGNKLSASVGKVSGTLNPESLKKREDPGHD
PTEELKRTIFVSNLPFDVEGEHVKQQFSVFGKVRSYLVVLHPVTKRPKGTAFIKFETPEA
ADAAISTGNAETGSGILMKGRRLTVLKALDKKSAHKKELNKIKKEEHDQRNLYLTKEGAI
LEGTPAAEGVSKDDLLKRQNLAEKKAIKLQNPIFHVSRTRLIVYNVPKEMTESELKRLFI
EAVRSRACKQSPVVRQVKLLKDTKKSNVNRKDRARGVAFIEFSQHEHALVALRVLNNNPG
TFGPEHRPIVEFALENVHTLKKRNSKLQSQQDHTSKLQDEREKAIDHISKTQDEGEKTMD
GKGRSRRQFSKLSQRKAGAHASEPSIDEKVMESKTKRASAVAASFEVMPPKRRKNGLEDG
GDGAKAKKQRKVSSRKEMEDKPERDDTKMKKQRRVSSGKREMGDILERDATKAKKRRKAS
SGEREMEDKLDELIEQYRSKFSSRPSNNKSDANTQPGEIRRWFQ
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagaacttgcaaaagggagaacccaatgagcaaagggacggagaccactgc
aaatccatggtttttgtaaccaacttgtcgtattcactttcatcctcagagttagagcaa
gctttcagtgatgtgggtcctgtgaggcgctgctttttggttaaaacgaaaggatcggat
gagaaccgagggtttggatatgttcagtttgccgtcatagaagatgctggtcgtgccatt
caactaaagaatcactctgtaatgggtggaagaaaaattagggtggaatttgccaaacag
cgagtaccccgtgaattgcgccagtcagtagcaagtcaagatgatgatttgcaaaaggtc
catccaaaagattctggtggtgatcttgaggacaagagcatgtcgcagaagagcaaaata
cctagaaaatcagaaggttctctgcaacaaatggatgcttctggcaataaacttgtgaac
aaaggagatggttctgaaaagcagagggttgctaaaaccgttgtatttggtgggcttgat
ggtgctgagatggctgaagaagtgtttcgatgtgctggggaaattggttctgtttgttct
attgcttcgcttttgaaacaagatcttgaattccatggacttggcaaagatggctgtact
atggatgcttcatctgtactcttcactagcgtcaaagaagcacgtgcggctgttgtctct
ttgcatcaacgggagatcaagggtaaatgtgtttgggcacgccaactgggtggggaggga
tcaaagacaaggaaatggcggctaattgttcgaaatttgcctttcaagattacagtgaaa
gagattaaagatgtattttcaaaagccggttatgtgtgggatatattcatccccaaaaat
actggtgaaggtggatcatccaagggatttgcatttgtcacctacacatgcaagcaagat
gcagcaaatgcgatcagtatgtgtaatggacacaaaattgggaaaagacctgttgctgtt
gattgggccctttcgaagaagatctatgattctgcggctgtattggatgaatccaaggaa
caaggacagcagaatgatacttatgaaaacaatggtgattcggctagtgaggataacata
agtgaaagctttgaagctgaaccttccgaagatcttcctgagcatagtgaagatgaatct
agtccaagagaaatgccgtctgagaaggagatggacattacgaagaaagttcttgagaat
atcatcaagtgcaatgcaaatggaaatcaagctcttgccagtaaagagaactattctctt
gaggccagtaaagatccaagtgttgcaaggtcaggaaacaagttatctgccagtgttggt
aaggttagtggtacccttaaccctgagagtttgaaaaaaagagaagatccaggtcatgat
cctactgaagaactcaagagaaccattttcgtgagtaacctgccatttgatgttgaaggt
gaacatgttaaacaacagttttctgtatttgggaaagtgcgaagttatcttgtggttctc
catccagtaacaaagcgcccaaagggaactgcttttatcaagtttgaaacaccagaggca
gctgatgcagcaatttcaactggcaatgcagagactggctcggggattcttatgaaggga
aggcgtcttactgttttgaaggcattagacaagaagtcagcccataagaaggagttgaat
aagataaagaaagaagaacatgaccaacgaaatctttaccttacaaaggaaggtgcaatt
cttgagggtacgcctgctgctgaaggagtttcgaaggatgatctgttgaagcgccaaaat
ttagctgagaaaaaggctattaaattacaaaatccgattttccatgtttcaagaactcgg
ctcattgtttacaatgtgccaaaagaaatgacagagagtgaattgaagaggcttttcatt
gaagctgttcgttctcgagcgtgcaaacaaagtcctgtggttcgacaggttaaacttcta
aaggataccaagaaatcaaatgttaatagaaaggatagagcacgtggagtggcattcatt
gagtttagtcaacatgaacatgcacttgtggccctgagagtacttaacaataatcctgga
acatttggtcccgagcatcgccctattgttgagtttgctcttgaaaatgtccacacatta
aagaaacgaaactccaagttacagtcgcagcaggaccataccagtaaactgcaggatgag
agagagaaagctattgaccacatcagtaaaacacaggatgagggagagaaaacaatggat
ggaaagggtagatcaagaaggcaattttccaagttgagccaaagaaaagcaggcgcacat
gctagtgagccatccattgatgaaaaagtcatggaatctaaaactaagagagcttctgca
gttgcagccagttttgaagtaatgcctcctaagagaaggaaaaatggtttagaagatggt
ggggatggtgccaaagcaaaaaaacagagaaaagtatcaagtagaaaggagatggaggac
aaacctgagagagatgataccaaaatgaagaaacagagaagagtgtcatcaggcaagagg
gaaatgggggacattcttgagagagatgccaccaaagcgaaaaaaaggcgaaaagcgtca
tccggtgaaagggaaatggaggacaaacttgatgagcttatagaacaatatcggtccaaa
ttttcatcacgcccgagcaataataagagtgatgcaaatactcaacctggagagatcagg
agatggtttcagtaa
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