KEGG   Amborella trichopoda: 18422166
Entry
18422166          CDS       T02990                                 
Name
(RefSeq) UBP1-associated protein 2B
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
atr  Amborella trichopoda
Pathway
atr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18422166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atr03019]
    18422166
   03041 Spliceosome [BR:atr03041]
    18422166
Messenger RNA biogenesis [BR:atr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     18422166
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     18422166
Spliceosome [BR:atr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    18422166
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 RRM_RdRP1_2 Cut8 Miga
Other DBs
NCBI-GeneID: 18422166
NCBI-ProteinID: XP_006827043
UniProt: W1NGJ9
LinkDB
Position
Unknown
AA seq 410 aa
MAKKRKSEKKSEKKSKKQKETQSKPAKKEEEQKPISSSSDSDSSDSEAETSSPEKFSQLI
EPFAKEQIIEFICDIADKDPSVYTHLKKLADKQVSHRKVFVHGLGWDSTSQTLISTFEKF
GEVEDCNVVLDKVTGRAKGYGFVLFKKRKGAIKALKQPQKKVQNRLISCQLASLGPVPSH
YGSDVSARKIYVSNVPSDASAEKLKAFFSKFGEIEDGPIGFDKFTGKSRGFALFVYKTQE
SAKKAIEDSYRLFDGHVLHVQKAADGPKFKPMGQAAQAGTPVPMGQTVGLAPGDLASMVS
PGVMAGGFQFGQGSGIGGFSGVVPSFGQMGTSGFGVGGLSGVPMGYDSVGLGGYGLGGVG
TSVLGTYGGQAGLAGQALGLQGVQSQQGLQVKGQIGAGAMGGLPPSYMSR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggccaagaagcggaagtccgagaagaaatcagagaagaagtcgaagaaacagaaggaa
acacaatcaaaaccagcaaagaaggaagaagaacaaaaacctatttcctcatccagcgac
tcagattcatcagactcagaagcagagacgtcgagccccgaaaaattctcccagctgatc
gagccctttgcaaaagagcagattattgaattcatatgcgatatcgctgataaagaccca
tctgtttatacccatctgaagaagctcgcggacaagcaggtctcgcatcgaaaggtcttt
gttcacggcttaggttgggattcgacctctcaaaccctaatttccacatttgaaaagttt
ggcgaagttgaagattgcaatgtggttcttgacaaggtcactggtagagcaaagggttat
ggttttgtgctctttaagaagaggaaaggagccattaaagctctgaaacaaccgcaaaag
aaggtccaaaataggttaatttcatgtcaattggcttctcttgggcctgttccttctcat
tatggatcagatgtttcagctcgaaaaatttatgtgagcaatgtcccatccgatgcatca
gctgaaaagctcaaagcctttttctcaaaatttggtgagattgaagatggtcccattggt
tttgataaattcactggtaaatcaaggggttttgctctctttgtgtacaaaacccaagaa
tcagcaaagaaagccatcgaagattcctacaggttatttgatggacatgttttgcacgtt
cagaaggcagccgatggtcccaagttcaagcccatgggccaagctgcccaagcgggtact
ccagtcccgatgggccaaacagtgggcttggctccaggggatttggcttcaatggtgagc
ccgggagtaatggctggtggttttcagtttgggcagggttcaggtattgggggcttttca
ggggtagttccatcattcgggcaaatgggcacttccggctttggagttggcgggctttca
ggggtgccaatgggctatgattcggtgggcttagggggatatgggcttggtggggtgggg
actagtgtgcttgggacttatggtggacaagcggggttggctgggcaggcattgggcttg
caaggggtgcagtcacagcaaggattgcaggtgaaggggcaaattggagcgggagcaatg
ggtgggcttccaccttcttatatgtctcgatag

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