KEGG   Amborella trichopoda: 18422168
Entry
18422168          CDS       T02990                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
atr  Amborella trichopoda
Pathway
atr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18422168
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atr03019]
    18422168
   03041 Spliceosome [BR:atr03041]
    18422168
Messenger RNA biogenesis [BR:atr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     18422168
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     18422168
Spliceosome [BR:atr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    18422168
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 18422168
NCBI-ProteinID: XP_006827046
UniProt: W1NFP8
LinkDB
Position
Unknown
AA seq 407 aa
MGQKRKADQDHNPSSSDSEEEAEPEAPHHRNSIIEEGEEEDIDELLEPFTKDQLVELIKT
AISLEPNVLNEARSLADRDPSHRKLFVHGLGWDTTSETLTSTFSSYGEIEDCNVVSDKST
GKSKGYGFILFKHRHSAKKALISPQKKIDGRMTACQFASSGPTETLAKKTQNPTSNENLA
RKIYVGNVLSDIAPEKIHTFFSKYGEIEEGPLGFDRNTGKAKGFALFVYKSSESAKRALA
EPNKIFEGHKLYCQRATDNTNKQKNGPMGLGLGPGESVQSNAPALIGQAPGQGLLVNGLT
PGLGPAFVGLNPMAAAFGAVLNPALAMGQNGVAQSLGLGGNFGNLASGYGNFQGLGVAYQ
PQGAGIVGFAPQVAMGAYQGSAQMGGNRPQQQGVGNLGNGGPPYVAH
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgggccagaaacgcaaggcagaccaggaccacaacccaagcagctcagactccgaagaa
gaagcagaaccagaagcacctcatcaccgtaactcgatcatagaagaaggagaagaagaa
gacatcgacgaactcttagaaccattcaccaaagaccagctcgtagaactcatcaagact
gccatttccttagagcccaatgtcctcaatgaagctcgcagccttgcagacagggaccca
tctcatcgcaagctttttgtccatggtttaggttgggacaccacctctgaaacactaact
tctaccttctccagttatggtgagatcgaagactgcaatgtagtgtctgataaatcgact
ggaaaatcgaagggctacggctttattctattcaaacaccgacattctgcgaaaaaggcc
ctcatctcacctcaaaagaagattgatggaagaatgactgcttgccaattcgcctcttct
ggtcccactgaaaccctagctaaaaagacccaaaatccaacttcaaatgaaaacctagct
cgaaagatctatgtaggaaatgtgctctcagatatagcaccagaaaagatccatacgttc
ttctcaaagtatggtgaaatcgaagaagggccattagggtttgatagaaacacaggaaaa
gcaaaaggttttgctctttttgtgtacaaatcctccgaatctgccaagcgggccttagca
gaacccaacaagatcttcgaaggccataagctttattgccagagggctactgataacact
aacaagcaaaagaatgggcccatggggttgggcttgggcccaggtgagagtgttcagtct
aatgcccctgccctaataggccaggctccaggacaaggcctgcttgttaatggtcttaca
ccgggcctgggcccagcctttgtgggcctgaacccaatggctgcagcttttggggcagtt
ttgaaccctgccctggcaatggggcaaaatggggttgctcaaagtttggggttgggtggg
aattttgggaatttggcgagtgggtacggtaattttcaaggcttaggtgtggcttaccag
cctcaaggggctggtatagtgggttttgctccacaggttgctatgggcgcttatcagggt
agtgctcaaatgggtggaaataggccacaacaacaaggagttgggaatttggggaatgga
gggcctccttatgttgcacattag

DBGET integrated database retrieval system