Amborella trichopoda: 18422341
Help
Entry
18422341 CDS
T02990
Name
(RefSeq) uncharacterized protein LOC18422341
KO
K19022
AP-5 complex subunit beta-1
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atr03400
]
18422341
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
18422341
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
18422341
NCBI-ProteinID:
XP_006826837
LinkDB
All DBs
Position
Unknown
AA seq
1171 aa
AA seq
DB search
MEKLGRQLSVQDWETIMEDFQSGPVKQEKWLALYPRLTILELALFNVLKKDFLLKSHLVV
FMEEFSEILIPEADVDEGLGSVLEALRALVQAPVDGVSVTYALKEQMMVSATSVVIVADG
LHKSSRRLGALAELLLTVINRPSYGVDRQTRGVACECLRELERAYPCLFYELSGHFWALC
QSERTHCAQNYILLLTHLVHDIVCLMGNNSRSKPNSPSPLSLASSLLSITNPIVPFNVPS
FLVASIPGEESNSIPFRELSSLNIKELRRVMAFLLERPQILTPSAMLEFVSMLIHVAVAL
ELQVSLLKVQFFGLLYSYNPLLWHVVLMLYSHFSDAFDGEEKEIARRLVLISKEVPEQLV
FRLLVVHWLLGLEVLSLERERSHTVVPMAYSFYPPVFDPLALKALKLDVLAYCAICVEAS
LSSVKRGDQQPGLEDQGSSMKEELGISGRKMFEAGLICVSSFKWLPPGSTETMVAFRMFH
KFLIGAASQEAINSSDTMASTSCTSFCTLQDMLVNTTLESRRLVPVIVGFIDRLMTCNSH
RWLGECLLQKFDEQLLPKLVSDYQLTSYFPIFNRIAENVTIPPRGLLELLAKFLVTLVEN
HGPENGLKSWSKGSKVLGICRTILMYHHSSRIFLPLSHLLNFACQYFPDLEVRDNARIYL
RMLLCIPGKKLRHVLNLGQQLPGDSSSPNLSTFFQTPSPRPPRDTRSGHKPSSYIDLNRV
VPLIVKQSWSLAISNLGIEDKQPGYGDAYGVEPSFRATEIEDGSDALAHEEPKITTGTSE
EPLRVMDAKIAEILGILRRHFASIPDYRHMPGHKIEVPCTLRFDASSFSDKWEPESPNME
AKVTKELPALYAIVISFSSSSNYGLIPSVHIPFLLGQAPSNEHVSPDEASTDMGHEGEMI
PLERLFSIEGNGFEEAEISEEEALTGSVIIELEPREPVPGLVNVSIEANIENGQTIHGLL
QSITVGIEDMFLRSPVPSDVPVDAIPKYHYDLFHALWEACGNSSNTGRETFFLKGGKGVA
AVNGTRSIKLLEVSFEHVVGAIERYLASFVVGVTGEPIVSSIKDNSTFKGIIVPEDELES
TSSSVATGFPYGDSGPLQLKYFPDETDSEINYSGFGRRHLGYFLVLIFLPPRFHLLLQME
VCNFSTLVRIRTDHWPCLAYMDEYLEALTAT
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagctgggaaggcagctttctgttcaggattgggagacaatcatggaggatttt
cagtcagggcctgttaaacaagagaaatggttggctctgtatcctcgtcttaccattctt
gaacttgctttgttcaatgtattgaagaaggatttcttgcttaaatcgcatctggttgtg
tttatggaagaattctctgaaattttgatcccagaagctgacgtagacgagggtttgggc
agtgtcctagaagctttaagagctctagttcaagctccagttgatggagtctctgtaaca
tatgctttgaaggagcaaatgatggtctctgcaacttcagtggtaattgtagctgatggc
cttcacaaatcatcacgtcggttgggagctttagctgagcttttgctcactgtgattaat
aggcctagttatggggttgataggcaaacaagaggggttgcttgtgagtgtttgagagag
cttgagagggcttatccatgcctattttatgagctttcaggccatttttgggccttatgc
caaagtgagagaacccattgtgcacaaaactacattctcttgttgacccatctggttcat
gacattgtttgtttgatggggaataattctcgatcaaaacccaattcaccttctcctctg
tctcttgcttcttcccttctctctattacaaacccaattgtccctttcaatgtaccaagc
tttttggtggcttcaatccccggagaagaatcaaattcaatacctttcagagagctatca
tctttgaatataaaggagcttcgaagggtcatggctttccttttggagaggcctcagatt
ttgactcctagtgcaatgcttgaatttgtgtcaatgcttatacatgttgcagtggctcta
gagcttcaggtctctctattgaaggtgcagttctttggccttctttactcctataaccct
ctcctatggcatgttgttcttatgctgtattcgcatttctcagatgcttttgatggtgaa
gagaaagaaatcgcccggcgtctcgttcttatatcgaaagaagtacccgaacaacttgtt
ttccgccttctcgtggttcattggcttttgggtctcgaggttttgtctctggagagggag
aggagtcacactgtggttccaatggcctatagtttttaccctcctgtttttgatccattg
gctctgaaagctctaaaattggatgtgcttgcctactgtgcgatatgtgttgaagcttct
ctctctagcgtgaagagaggggatcaacaacctggtttggaggatcaaggttcttcaatg
aaagaggagctaggaatttctggaaggaaaatgtttgaagctggtcttatatgcgtctcg
tcatttaagtggttgccaccagggagcactgaaaccatggtagcatttcgtatgttccat
aagtttttaataggagctgcatcccaggaagcaattaattcatctgataccatggcttcg
acatcatgcacgagcttttgtacattacaggacatgctagtgaacacaacattagagtct
cgtagattggttcctgttattgtgggtttcattgatcggttaatgacgtgcaattcacat
cggtggttgggagaatgcctgcttcaaaaatttgatgagcaattactcccgaagcttgtt
tcggattatcagttgacatcttacttccctatctttaatagaattgcggagaatgttact
attcctccccgcggtttactggagttgcttgccaagtttcttgtgactcttgtggagaac
catggtccagaaaatggtctaaaatcgtggtcaaagggaagtaaagtgttaggtatatgc
aggactatactcatgtatcaccatagttcaaggattttccttcccctctctcatctcctg
aatttcgcttgccagtatttccctgacttggaggtccgcgacaatgcaaggatctacttg
aggatgctcttatgcatcccaggaaagaagcttaggcatgtactgaacctaggacaacag
cttcctggtgactcctcttctccaaacctctccacattcttccaaacgccatctcctcga
ccgcctcgggatacaaggagtggccataagccgtcttcatacattgatctcaatcgtgtg
gttccacttattgtcaagcagtcttggtccttggctatatcaaatttgggaatagaagac
aagcagcctgggtatggtgatgcttatggggttgagccttcctttagagccactgagatt
gaagatgggtcagatgcactggcccatgaagagcctaagataactaccggaacatcagag
gagcctttgagagtgatggatgcaaagattgcggagatcttgggaatccttaggagacat
ttcgcatcaattcctgactatcgacatatgccaggccataaaatcgaagtaccatgtaca
ctgagatttgatgcttcttcttttagtgacaaatgggaacccgaatcgccaaatatggaa
gctaaagtaactaaggaattacctgctctatatgccatagtgatcagcttttcatcttct
tcaaattatggtctaatcccatcagtccacataccttttcttcttggacaagctcctagc
aatgagcatgtttccccagatgaagcttccactgatatgggacatgaaggtgaaatgatt
cctttagaaaggttgttcagtattgaaggaaatggttttgaagaggcagaaataagtgaa
gaagaagccctgacagggtcagtgataattgaactggagcctcgagagccagttcctggc
ttggtgaatgtttccattgaggcaaacatagagaatgggcaaacaattcatggtctgctt
caaagtatcacagtgggtattgaggacatgtttctcaggtctcctgttccttctgatgtt
cctgtagatgcaattcctaagtatcactatgatctgtttcatgctctttgggaggcatgt
ggtaactctagtaacacaggtcgggaaacattcttcttgaaagggggcaaaggtgttgca
gcagtcaatgggacgagatcaattaagcttttagaagtttcatttgaacatgtggttgga
gccatcgagcgttatttggcttcctttgttgttggcgtgactggtgagcctattgtgagt
agcataaaggataacagcacttttaagggtattattgtccctgaggatgagttggagagt
acaagcagcagtgtggccacgggttttccatatggtgatagtggtccccttcagctcaag
tattttccagacgaaactgattcagagattaattattctggatttggtaggagacacctt
ggttattttcttgttttgatattcctgccccctagatttcatctcctccttcagatggag
gtttgcaatttttcaacattagttcgtatcagaaccgatcattggccatgtcttgcttat
atggatgaatatttggaagctttaactgcgacctga
DBGET
integrated database retrieval system
