Amborella trichopoda: 18422414
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Entry
18422414 CDS
T02990
Name
(RefSeq) vacuolar amino acid transporter 1-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
atr
Amborella trichopoda
Pathway
atr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
18422414
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atr02000
]
18422414
Transporters [BR:
atr02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
18422414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
Spore_permease
Motif
Other DBs
NCBI-GeneID:
18422414
NCBI-ProteinID:
XP_011621943
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MDTHYCGSQNCVDKREKKGSHLEQKLICDEEQGNYGWFCSDEEAGIDSRHDKEWRALAGE
GTTFFRSCLNGLNTICGIGILSISYALSEAGWAGLALLFLVAIVCCYTGILLQRCMDTDT
NIQTYPDIADRAFGYYGQVILSVFFYLELYLVAIEFLILEGDNLAKLFPSLSFEVAGWTI
ERTQGFIILSALIILPTAFLRSLDLLAYVSASGILASLVVIASVTSSGLVDGVGFHSKGR
ALNPSGIPSAISLFAFCYCGHAVFPTICSSMKDRTKFSKVLILSFTISTLIYGSMGILGY
LMYGEEVKSQVTLNLPNGKLSSKIAIYTTLINPFTKYALVVTPIASAIEDALPSTKSSRS
TNIFMRTLLMASTVTVALTIPLFGDLMTLIGSFLSCTVSLIFPCICYLKLFGISRIYKLE
LMFICGILGVGSSIAILGSYYSLRQIAENL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggacactcattattgtggctcacaaaattgtgtggataagagagagaagaaaggttcg
catttggagcaaaagcttatttgtgacgaggaacaagggaattatgggtggttctgtagt
gatgaggaggcaggtatagatagcaggcatgacaaagaatggcgggctttagctggagag
gggaccaccttcttcagatcttgcttgaatggcctcaatactatatgcggaattggaata
ctatcaatatcatatgcactatcagaagctgggtgggcagggctagctctactctttcta
gtggccattgtctgttgttacactggcattcttcttcaaagatgtatggacacagacacg
aatatccaaacctacccagacatagcagaccgagcgtttggctattatggacaagtgata
ctttcagtgtttttctatctggaactctatctggtagcaatagaattcttgatcttggag
ggagataatctggcaaaattatttcccagtttgagctttgaggtggctgggtggacaatc
gagagaacccaagggttcataattctttcagcactaatcatattaccaactgcttttctg
agaagcttggacctgctcgcttatgtttcggccagtggaatcttggcttcattggttgtg
attgcttctgttacgtcgtctggcttggtagatggagtgggattccattcaaagggaagg
gctctcaatccaagtggaatcccttctgccataagcttatttgccttctgctattgtggg
catgctgtctttcccacgatatgttcttccatgaaagataggaccaaattttctaaggtc
ttgattctttctttcacaatctccaccttgatctatggttcaatggggattcttgggtac
ttgatgtacggagaagaagtaaaatctcaggtcacactaaacctccccaatggcaaactc
agctccaagatagcaatttacaccactctcataaatccatttacaaaatatgcattggta
gtgaccccaattgcatcagctattgaagatgccctcccttctaccaagagcagcaggtca
acaaacatctttatgagaaccttactcatggcaagcacagttacggtggccctcacaata
ccattatttggggatttaatgaccttaattggatcttttctaagctgcacagtttctttg
attttcccatgcatatgttacctcaagctgtttgggatctcaaggatttacaaactggag
ctgatgtttatatgtgggattttaggtgttggttcttcaatagccattttggggagctat
tattccttacgacaaattgctgaaaatttatag
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