Amborella trichopoda: 18422502
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Entry
18422502 CDS
T02990
Name
(RefSeq) LOW QUALITY PROTEIN: 26S protease regulatory subunit 6A homolog
KO
K03065
26S proteasome regulatory subunit T5
Organism
atr
Amborella trichopoda
Pathway
atr03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
18422502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
atr03051
]
18422502
Proteasome [BR:
atr03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
18422502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
RuvB_N
Prot_ATP_ID_OB_C
AAA_5
DUF815
AAA_7
AAA_14
zf-BED
TIP49
AAA_22
AAA_2
RNA_helicase
nSTAND3
AAA_24
Mg_chelatase
DUF4301
TsaE
AAA_3
Anoct_dimer
AAA_11
APG6_N
Motif
Other DBs
NCBI-GeneID:
18422502
NCBI-ProteinID:
XP_020523072
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MTEDSEDDEIACMSTEDIIHNSRVLDREMRVFEDELQRTNLVLETFKGMIKVKQKKIKVH
MHLPYLVAYIVEIMEMNMEDDAEEEGANVDLDSQRKRKCVVLKTSTRKTIFLPFVALVDP
DKLKPGDLVGVNKNSYLIIXEYDLRVKAMEVDEKPTEDYNDIGGLEKQIQEFAEAIVVPI
THKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQINATFLKLAGPQLVQKFIGDRAN
LVRDAFQLAKEKSPCIIFIDEIDAFETSLHCNGPMAEYASSKPTDPGWKYGTCSNPLNKN
RIECMFCKNCYNVGINRLKKHLVDIKGDVASCILVLAKVRREILENLEGVKAKKQEVKIT
RDELVRAVDVLGVRQEEEDMYIEMVDAEKKLAMGHIYKALQDAKEEIKRSLWDEKWYGEF
LKIIEDKWNSHLEMPLHLVEYYLNLAHFYTDVEVHSRPEFMDAFNQCNVKLNPDPEVQDK
AMMELDLYRLGTGSLVSEFSAITVSDSMPSLPREADFIGTGLHVCQHDLHFSIAKSETFP
NIYLKGGTGLFPVRKVCAKATMHGKVCTKATMHGKVIAATNRADIXLLMHSGRLDRKIEF
PHPTEEARVKILQIHSRKMNVHPDVNFEELARFADDFNGAQLKTVCFEAGMLALRRNATE
VIHEDFNEGIIRVQAKKEASLNYYA
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggattctgaggatgatgaaatcgcttgcatgtcgacggaggacattatccac
aactctcgagttcttgatagggaaatgcgcgtctttgaggatgagttgcagagaacgaac
ctagtgttggagacattcaagggaatgataaaggtgaaacagaagaagatcaaggtccac
atgcatctcccatacttagttgcttacatagtcgagattatggaaatgaatatggaggat
gatgctgaagaggaaggtgcgaatgttgatctagattcccaaaggaagagaaagtgtgtt
gtgcttaaaacatctacacgtaagaccatatttttgccttttgttgcgctcgtagatcct
gacaagcttaaacctggtgatttagttggggtgaataaaaacagttacctgataatcnnt
gagtatgatttgcgtgttaaggccatggaagttgatgaaaagcctactgaagattacaat
gacataggaggtcttgagaagcagattcaagaatttgccgaggctattgttgtccctata
acccacaaggaaaggtttcagaaattaggagttcgtcctcccaaaggagttcttctctat
ggacctcctggaacaggcaaaactctaatggcacgtgcatgtgctgctcagatcaatgct
acttttttgaagcttgcaggtccccaattagttcagaagttcattggtgatcgagcaaat
cttgtgcgtgatgcatttcaacttgctaaagagaaatccccctgcatcattttcatagat
gagattgatgcatttgagacttcattgcattgcaatgggccaatggctgaatatgcatca
agtaagccaactgatccaggttggaagtatggaacttgttcaaatcctcttaacaagaat
aggatcgagtgcatgttttgcaaaaactgttataacgtcggcatcaacagattaaagaag
catttagtcgacattaaaggggatgtggcgtcatgcattctagtgcttgctaaggtcagg
agagagatactagagaacttggagggggtgaaagccaagaaacaggaggtgaaaataaca
cgagatgaacttgtaagggctgtagatgttcttggagttcgacaagaggaagaagacatg
tatattgagatggttgatgctgagaagaaacttgctatggggcatatctataaagccttg
caagatgcaaaggaagaaatcaagagatctttgtgggatgaaaagtggtatggggagttt
ttgaagattattgaagacaaatggaactcccatcttgagatgcccctgcacttagtagaa
tactaccttaaccttgctcacttttacaccgatgttgaggtacatagtaggcctgagttc
atggatgctttcaaccagtgcaatgtgaagctcaaccctgatcctgaagtgcaagataag
gcaatgatggagttagatttgtataggctcggtactggatctctagtctcagagttctca
gccatcactgtatcagattcaatgccttctctccctagagaagcagatttcattggtacg
gggttgcatgtctgtcaacatgatttgcatttctctattgccaaaagtgaaacatttcca
aatatttatctgaaaggaggaactggtctctttcctgttagaaaggtttgcgcaaaagca
actatgcatggaaaggtttgcacgaaagcaactatgcatggaaaggtcatagcggcaacc
aatcgagcagatattnngcttcttatgcattcgggacgtctagatcgcaagatagagttc
cctcacccaactgaagaagcaagggtgaaaatcttgcagatacattcgaggaaaatgaat
gtgcatcctgatgtgaattttgaagagctagcacgttttgctgatgattttaatggggca
cagttgaaaactgtttgctttgaagctggcatgctagcattgcgacgaaacgcaactgag
gttatccatgaagatttcaatgaagggatcattcgagtgcaggctaagaaggaggcgagc
ctaaattactatgcatag
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