Amborella trichopoda: 18422538
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Entry
18422538 CDS
T02990
Name
(RefSeq) uncharacterized protein LOC18422538 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
atr
Amborella trichopoda
Pathway
atr03030
DNA replication
atr03410
Base excision repair
atr03420
Nucleotide excision repair
atr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
18422538
03410 Base excision repair
18422538
03420 Nucleotide excision repair
18422538
03430 Mismatch repair
18422538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atr03032
]
18422538
03036 Chromosome and associated proteins [BR:
atr03036
]
18422538
03400 DNA repair and recombination proteins [BR:
atr03400
]
18422538
DNA replication proteins [BR:
atr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
18422538
DNA Replication Termination Factors
ELG1-RFC complex
18422538
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
18422538
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
18422538
Check point factors
HRAD17(Rad24)-RFC complex
18422538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
DNA_pol3_delta2
AAA_16
TsaE
Sp-DndD
DUF815
Motif
Other DBs
NCBI-GeneID:
18422538
NCBI-ProteinID:
XP_011624269
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MDRQTRSSSSIKQRYRRTSGYEPSDTESEWQDGPWIHPKRKDPIRKSTAGDPPRSTARNT
SPYGRIQKHSSPDKTRKDDDTEVYKPRRDDRAAKSKSPYKTRMDDAAEKNGAGVKSPYKK
RGDKKNGEKTYKIRREKSPYKIHKEESLVEENNHKASMSRTSPYKIRIEEKEVEFKATRR
SKSPYPRMDTSPSRVSGSNPDRRSVSVQKHGSARQKVPTAGSDGNAKMEKSKPLVVAMVE
NNSNDSIVPGDLFFSHVAKPAAAKKSAFPAKKKTEALKDIFSPSQEKIEAPKAIVALKNL
RSESSGILSRTNSTASASAMSKSSHLGSSRSFGNMFVAERLKDTTWFSCVKRGGVCRTGS
KKSPDKRDLDEASFIEKAFVVERLREFWADKHSPPTLAEFTCQKEQAQRLKQLISQNNCP
NVMFKGPSGSGKKALTKAFLREIFGDSAANVSSALRTFYFEELKSGHVIHAVTSSLHHLE
LNLNKEPKNGRYILMSLIKELINTDAPPPEDSDISLRPDFKVIVLYEVEKLGEEVQHLIK
WVMDCYTDTCKIVLSCEDDTQILESVKSRCQVIKLDAPVTHEIMEVLLQIARKENIDLPM
SLAAKIATKSKQNLRRAVMALEACRAHNYPFIDEQPIPLGWEDLVVEISTELLADPSPKR
HFYTRVKIQKLLVDFVHPKLILLKLVEQFLRGVDSGIKRELYYWHAYYDKRMPEGTSALL
KLEEFVAKFMSIYRRSFRPRPLP
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggataggcagaccaggtcatcctcctctatcaagcaaaggtacaggcgaaccagcgga
tacgagccgtccgatacagaatccgagtggcaagatggcccttggatccatcccaagaga
aaagaccccatccgcaaatccacggccggagatccacccagatcaacggccagaaatacc
agcccatacggccgaattcagaaacactcctcccctgataaaacacgcaaagacgacgac
acggaagtgtataaacctcgtagagatgatcgtgccgccaaaagcaagtcaccatataaa
acacgtatggacgacgccgcagaaaagaatggcgccggtgtaaagtcaccgtataagaaa
cgaggtgataaaaaaaatggagaaaagacgtataaaatacgtagagagaagtccccgtat
aaaatacacaaagaagaaagcttagtggaagaaaacaatcacaaggcttcaatgagtcgt
acatctccctataaaatacgtatagaagaaaaggaagtagagttcaaagcaacaaggcgc
agtaaatcaccgtatccgcgaatggatacgagcccttccagggtttcgggatctaatccg
gaccgtcgatctgtttcggtccagaaacatggttcggctcggcagaaggtaccgacggcc
gggagtgatgggaacgctaagatggagaaatccaagccgttggttgttgccatggtggag
aataatagcaatgactcgatcgtgcctggggacctcttcttctcacacgtggccaaacct
gcggctgcgaagaaaagcgcctttcctgccaagaaaaagactgaagctctcaaagacata
ttttccccatcacaggaaaagattgaagctcccaaagctatagttgcactgaagaattta
cgatcagaaagtagtgggatattatcaagaacaaactcaacagcttcagcctctgctatg
agcaaaagcagccatcttggaagcagcaggagttttggcaacatgtttgttgcagagaga
ctgaaagacacgacatggttttcgtgtgtgaagagaggaggggtttgtaggactggttcg
aagaagtcccctgataagagagaccttgatgaggcttctttcattgagaaggcttttgtg
gttgagagattaagggagttttgggcagataagcatagcccacctacacttgctgagttc
acttgccaaaaagaacaagcccaacgtctcaaacagctaatttcccaaaataattgtccc
aatgttatgttcaagggaccttctggttcagggaagaaagcactaaccaaagccttttta
cgtgaaatctttggagattcagctgcaaatgtttcttctgctttaaggaccttctatttc
gaggaactaaaatcaggccacgtgattcatgctgtgacttctagccttcatcatttggag
ctcaatttaaacaaggagccaaagaatggtagatatattcttatgtctctaatcaaagag
ttgatcaacactgatgcacctccccctgaagacagtgatataagcttgagaccagatttt
aaagtgattgtcttgtatgaggttgagaagctaggagaagaagttcaacatttgataaag
tgggtcatggattgctatactgatacatgcaaaatcgtactctcatgtgaagatgacacc
caaattctagaatctgtcaagagccgctgccaagtgattaagttggatgcccctgttacc
catgaaataatggaggtgctccttcagatcgcgcggaaggagaatatcgatcttcccatg
agtttagcggctaaaatcgctacaaaatccaagcagaatttgagaagagcggtaatggct
cttgaagcatgcagagcacacaactatcccttcattgatgagcagccaattccacttggg
tgggaggaccttgtagttgaaatttccacagaacttctagccgacccctctcccaaaaga
catttttacacacgtgtgaagattcagaaactccttgtggattttgtccatccgaagctc
atacttctgaaacttgtggagcagtttcttaggggagttgacagtgggataaagagagag
ctctactattggcatgcctactatgacaagaggatgcctgagggcaccagtgcactcctt
aaacttgaagaatttgtggcgaagttcatgagcatttacaggaggagcttccgaccccgt
ccactcccatag
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integrated database retrieval system
