Amborella trichopoda: 18423163
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Entry
18423163 CDS
T02990
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
atr
Amborella trichopoda
Pathway
atr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18423163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18423163
Spliceosome [BR:
atr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
18423163
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
18423163
NCBI-ProteinID:
XP_006827826
UniProt:
W1NHJ1
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All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MATLADSFLADLDELSDNEAHLLVEDDGDAQEVEEDGGIADIEALNYDNLDSVSKLQNTQ
RYIDIMQKVENALDKGSEISSSGTVLEDDPEYQLIVDCNALSVDIENEITIIHNFIRDNY
RLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGRPLS
EENLQKTIDACDRALALDAAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLSA
LGKMPACNLQLLGAKKKNLAGFSTATSQFRVGYIEQTEIIQSTPPSLRIRACRLLAGKST
LAVRVDLERGDPTGQIGRDLRESIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLR
KMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSLGPSKLAAKA
AKKFKEKQYGSSGATSGLTSSLAFTPVQGIELTNPQALANQLGSGTQSTYFSEIGTFSKI
KRT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccactcttgctgattctttcttggcggatcttgatgaattgtctgacaatgaagct
catcttcttgtcgaagatgatggggatgcacaagaggtggaagaagatggtggcattgct
gatattgaggctcttaattacgataatctggatagtgtatctaaactgcagaatacacag
cggtatattgacatcatgcagaaagttgaaaatgctctcgacaaaggctcagagatctca
agtagcggtactgttttggaggatgatcctgagtaccaattgattgttgactgtaatgct
ttatcagtggacattgagaatgaaatcactatcattcacaattttattcgggacaactat
cgcttgaagttccctgagctcgaatcacttgtacatcacccaattgattatgctcgagtt
gttaagaaaattggaaatgagatggatttaacacttgttgatctagaagggcttttaccc
tctgcaataatcatggtagtttctgttactgcatcaaccactagtggcaggccactttca
gaagaaaatcttcaaaaaacaattgatgcatgtgatcgggcccttgctcttgacgccgca
aagaagaaggttcttgattttgtggagagtagaatgggttatattgctccaaatctttct
gctattgttggaagtgcagttgcagcaaaattgatggggacagctggtggtttgtctgca
ctgggaaaaatgcctgcttgcaaccttcagctacttggcgcgaagaaaaagaacttggca
ggattctctacggcaacctctcagttccgtgtaggctacattgagcaaacagaaattatt
caaagcactcccccttctttgagaattcgagcatgccgacttttggctggaaagtcaaca
cttgctgtacgagttgatttggaaagaggcgatccaacagggcagatagggagggactta
agagagagtatacgaaaaaaaattgaaaaatggcaagagcctcctcctgcaaagcaaccg
aaaccacttccagttccagattcagagccaaaaaagaagagaggcggtcgtcggctgcgg
aagatgaaggaaaggtacgcaataactgatatgaggaagcttgccaatcgaatgcagttt
ggagttccagaagagagctctttgggtgatggactaggagaaggttatggcatgcttggt
caagctggaagtgggaaattgcgtgtatcacttggtccaagcaaacttgctgcaaaagca
gccaaaaagttcaaggaaaagcaatatgggagtagtggtgctacctcaggtttgacatca
agtttggcatttacccctgtgcagggaattgaactgaccaatcctcaggcacttgccaat
caacttggtagtggaactcagagcacctatttttctgaaattggaacattttcaaagatc
aagaggacataa
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