Amborella trichopoda: 18423291
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Entry
18423291 CDS
T02990
Name
(RefSeq) protein argonaute 4B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18423291
03036 Chromosome and associated proteins [BR:
atr03036
]
18423291
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
18423291
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
18423291
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
18423291
microRNA pathway
RISC loading complex
18423291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
18423291
NCBI-ProteinID:
XP_011626459
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MDPSEVKTEDQLPPPPPPPPLPPNVIPQRLVPKLNPMERKGLGSSGERIRLLTNHFRVSF
NSSDEYFFQYSVALASDEKRAVDGKGIGRRVLDRVYQTYKADFSGKELAYDGEHTLFTVG
ALPQNNMEFTIVLEDLASNRGGNGSPSEVERKRQKRPGRTQTIKVEISYAAKIPLKSIAA
ALRGDATDKSQDALRVLDIILRQHAAKKGCLLVRQSFFHHDPKNYADLGGGVTGCRGFHS
SFRPAQSGLSLNMDVSTTMILKPGDMVDFLLANQNVKTPYQIDWKKARRVLKNIRISTRH
TNREFKITGFSENICKEQLFSMRVRNGDSPGGNETIEVTVYDYFVNEKKIKLNYSGDLPC
VDVGRPKRPNYLPVELCVLLPLQRYTKALTTIQRSNLVEKSRQKPVERMRVLNDAMRLNN
YNAETLLKTAGVSISQNFTEVEGRVLSAPKLKFGNGEDFVPRGGRWNFNNKQLHRPTRIE
RWVIVNFSARCDTNYLANEMVKSGQRKGVVIAPPFCVIEEDPRARCPNPSVRVDRMFENM
KSKLPGAPQFVLCILPERKNSDIYGPWKKKLLSDLGIPTQCIAPAKINDQYLTNVLLKIN
SKLGGINSLLAAESSLQIPIISKIPTIILGMDVSHGSPGQSDIPSIAAVVSSRDWPFISR
YRASVRTQSPKVEMIDSMFKPQPDGNDTGLIREALVEFFVSSNKRKPEQMIVFRDGVSES
QFTQVLNIEVDQIIQACNHLEDGYRPKITVIIAQKNHHTKLFQKDSDTNVPPGTVVDSVI
CHPRNYDFYMCAHNGPIGTSRPAHYHVLMDEIGFRPDDLQNLVHSLSYVYQRSTTAISIV
APISYAHLAASQMQQFLKAADDNSDASSSHSGGGSGVSSAGSVPVPELPKLHSDVSSSMF
FC
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggatccttccgaagtgaaaactgaagatcagttacctcccccacccccacctccacca
ttgccccctaatgtgatcccccagcgcttagttcccaagcttaaccccatggagcgtaaa
gggttggggtcgtcaggtgaacgtatccgcttgctcaccaaccatttccgagtcagcttt
aattcatctgacgagtattttttccaatatagtgttgctcttgcatcagatgaaaagaga
gcagttgatggcaagggaattggtagaagggttttagatagagtctatcaaacatataaa
gcggacttctccggcaaggagcttgcctatgatggagagcataccctgttcacagtgggt
gcccttccacaaaacaacatggagttcacaattgttcttgaggatttggcttccaatagg
ggtgggaatggtagtcccagcgaggtggaaagaaagagacaaaagcggccaggtcgcacc
cagactatcaaggtcgagataagttatgctgcgaaaattcctttgaaatctattgcggca
gcccttcgaggggatgccactgacaaatctcaggatgctcttagagtcctggacatcatc
ttacgtcagcatgctgcaaagaagggttgtcttctggttcgccagtcattctttcaccat
gatccgaaaaattatgcggacctgggtggtggtgtcactggttgtaggggttttcattca
agtttccgtcctgctcaaagtgggttgtcattgaacatggatgtgtccacaacgatgatt
ctgaaacctggtgatatggtggattttctactggctaaccagaatgttaagactccctac
cagattgattggaagaaggcgaggcgtgtgctgaagaacatcagaatctccacgagacac
acaaatagggaattcaagattaccgggttcagtgaaaacatctgcaaagagcaattattt
tcaatgagggtcagaaatggagatagccctggtggtaatgagaccattgaagtaactgtt
tatgactattttgtcaatgagaagaaaatcaaattgaattattctggggacttgccttgt
gtcgatgttgggaggcctaaacgtcccaattacctccctgttgagctctgtgtgctcctt
ccactgcaacgctacaccaaggcgctcactacaattcaaagatcaaacctcgttgaaaaa
tcgaggcaaaagcctgtggagcgcatgcgggtgctaaatgatgctatgaggctcaataat
tacaatgctgaaacattattaaaaacagctggggtttccatcagccaaaattttactgag
gttgaaggccgtgttctgtcagctccaaagctaaaatttggaaatggggaagattttgtg
ccccgtggtggtcgctggaatttcaataacaagcaattacatcgacctactcgaatagag
cggtgggtgattgtcaatttctctgctagatgtgacaccaactaccttgcaaatgaaatg
gtgaaatctggtcagaggaaaggcgttgttattgcccctcccttctgtgtgattgaagaa
gatcctcgtgcaaggtgccctaatccatctgttagggttgatcgaatgtttgaaaacatg
aagtccaagcttccaggggctccccagtttgtgctctgtattcttcctgagcggaaaaat
tctgacatttatggtccatggaaaaagaagcttttatctgaccttggcatccctacccaa
tgtatagcacctgcaaaaatcaatgaccaatatttgaccaatgtgcttctaaaaatcaat
tccaagttgggtgggatcaactccttgctagctgctgaaagttcactgcaaattcctatt
atatccaaaattcccacaattattctgggtatggatgtttcccatggttctcctggtcaa
tcggatattccgtcaattgctgcggtcgttagctcgagagattggccatttatatcaagg
tatagggcttctgttagaacacagtccccaaaggtggagatgattgattcgatgtttaaa
ccacagccggatggtaatgacacaggacttattagggaggcattagtggagttttttgtg
agtagcaacaagcgaaagccggagcaaatgatagttttccgggatggggtcagcgaatca
cagtttacccaagtcttgaatattgaagttgaccagatcattcaggcatgcaaccacctt
gaggacggttacaggccaaaaattaccgtgattattgcacaaaagaatcaccatacaaaa
ttattccagaaagactctgatactaatgttcccccaggtactgttgtggattctgtgatt
tgtcatcctcgaaactatgatttctacatgtgtgctcacaatgggccaattggtacttca
aggccagctcattatcatgttttgatggacgagattgggttcaggcctgatgacctgcaa
aatcttgtgcacagtctatcgtatgtctatcagaggagtacaactgccatatccatagtt
gctccgatcagttatgcccatctggctgcttctcagatgcagcagttcttgaaggctgca
gatgacaattcagatgcttcttcgagccacagtggtggcggtagtggtgtgtcgtctgct
ggatctgttcctgtgccggagctgcctaagcttcatagtgatgtttcgagctcaatgttc
ttttgttga
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