KEGG   Amborella trichopoda: 18423529
Entry
18423529          CDS       T02990                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
atr  Amborella trichopoda
Pathway
atr03420  Nucleotide excision repair
atr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    18423529
  09124 Replication and repair
   03420 Nucleotide excision repair
    18423529
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:atr04121]
    18423529
   03400 DNA repair and recombination proteins [BR:atr03400]
    18423529
Ubiquitin system [BR:atr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     18423529
DNA repair and recombination proteins [BR:atr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      18423529
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      18423529
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st
Other DBs
NCBI-GeneID: 18423529
NCBI-ProteinID: XP_006828193
UniProt: W1NK52
LinkDB
Position
Unknown
AA seq 1089 aa
MSVWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATLELFRPHGEAQDFLFIATERYKFCVLQWDADASELITRAMGDVSDRIGRPTDYGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCARPTIVVL
YQDNKDARHVKTYEVVIKDKDFVEGPWSQNNLDNGAGLLIPVPMPLGGVIIIGEQTIVYC
SASVFKAIPIRPSITRAYGRVDADGSRYLLSDHAGLLHLLVIIHEKERVTGLKSELLGET
SVASTISYLDNAFVYVGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELHGIKGMWSLRSATDDPYDTFLVVS
FISETRILAMNTDDELEETEIEGFHSQAQTLFCQNAVHNQLIQVTAQSVRLVSCSSRELL
NEWKAPSGFSVNVATANASQVLLATGGGHLVYLEVGVGILTEVKHIQLEYEISCLDINPI
GEDSKFSKLAAVGMWTDNSVRIFSLPGLDLIVKELLGGEIIPRSVLLCAFEGVSYLLCAL
GDGHLFNFLLNVNTGELSDRKKISLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVNHMCPFNSAAFPDSLAIAKEGELTIGSIDDIQKLHIRAIPLGEHARRICH
QEQNRAFATCNVKYSQSNMDESEMHFIRLYDDQTFEILSSYQLDTYENGCSILSCSFTDD
SNAYICVGTAYVLPEENEPSKGRILVFVVEDGKLMLVAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLRDDGSRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNASWMTAVEILDDDTYLGAENNFNLFTVRKNSDAATDEERGRLEVIGEYHL
GEFVNRFRHGSLVMRLPDSESSQIPTVIFGTVNGAIGIVASLSQHQFKFFEKLQGCLVKV
IKGVGGLSHEQWRSFNNEKKTADARGFLDGDLIESFLDLSRARMEEISTAMRVPVEELCK
RVEEMTRLH
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgagtgtctggaactatgtcgtgactgctcacaagcccacaaatgtgacacattcttgt
gtgggaaacttcactagtcctcaggaactcaacctaatcatagcgaaatgcacacgcatt
gaaattcatcttcttactccacagggtttacagcctatgttggatgttccaatatatgga
aggatagcaacacttgaactctttcgcccacatggtgaagctcaagattttttattcatt
gcaacagaaagatacaaattttgtgtccttcaatgggatgctgatgcatctgagctcatc
acaagggcaatgggagatgtctctgatcgaataggccgtcctactgactatggacagatt
ggcattattgatcctgattgtcgactaattggccttcatctttacgatggcttatttaag
gttataccttttgataacaaaggccaactcaaggaagccttcaatattagactagaagag
cttcaagttttggatatcaaatttctctacggctgtgcaaggcctacaattgttgtcctt
tatcaggataataaagatgctcggcatgttaaaacttatgaagttgttattaaggataag
gattttgttgagggtccatggtcccagaataatcttgataatggcgctggtctgttgata
cctgttcccatgcctctgggtggtgttatcattattggagagcagaccatagtctattgc
agtgcgtctgtatttaaagctatcccaatcagaccatctatcacaagagcctacgggaga
gttgatgccgatggttcccggtatctgcttagtgatcatgctggactgttgcatttgctt
gttatcatccatgaaaaagaaagggttactgggctcaaatcggagcttttgggtgagaca
tctgttgcctccacaatatcctatcttgacaatgcttttgtatacgttggttctagctat
ggggattctcagcttataaagcttaatttgcaacctgatgcaaaaggttcgtatgtggaa
gttcttgaaaggtatgtaaatttggggcctattgtggatttctgtgttgtggatctcgag
aggcaagggcaaggccaggttgtgacctgctctggagcatttaaggatggatctctccga
gttgtccggaatggcatagggatcaatgagcaggcatcagtggaactccatggcataaaa
ggaatgtggtcattacgatctgcaactgacgatccctatgataccttcttggttgtcagc
tttatcagtgagactcgtattcttgcaatgaatacagatgatgagttagaagaaacagag
attgaaggatttcattctcaagcacaaactttattctgtcagaatgccgtacacaatcaa
cttattcaggtgactgctcaatctgtacggttggtaagttgttcttctagggaactgctg
aatgaatggaaagctccatcaggattttctgtaaatgttgctacagctaatgcctcgcag
gtactgttggccactggtggtggtcacttagtttacctggaagttggggtgggaatccta
actgaggtgaaacatatacaactggagtatgaaatatcttgcctggacataaatcctatt
ggtgaagattccaagtttagtaaactggcagcagttggaatgtggacggataatagtgtt
aggatattttctcttcctggactcgatctgattgtaaaagagcttctcggtggagagatc
atccctcgctctgtactcctatgtgcctttgaaggggtatcttatttgctgtgtgccctt
ggggatgggcatttattcaattttttattgaacgtgaatactggtgaattgtctgatagg
aagaagatttcgcttgggacacaacctatcacactccgcactttctcgtccaaaaatact
acacatgtgtttgccgcatcagatagaccaactgtcatctacagcagtaataagaaatta
ctttacagcaatgtaaatttgaaagaagtcaatcatatgtgtcctttcaattctgctgct
ttccctgacagccttgctattgcaaaagaaggtgaactcactattggttctatcgatgat
atccaaaagcttcatattcgtgccataccactgggagagcatgcccgccgcatctgtcac
caagaacaaaatcgggcttttgctacctgcaatgtgaagtattctcagtcgaatatggat
gagtccgagatgcactttatacgtctatatgatgaccagacttttgaaatcttatcatcc
tatcagcttgatacttacgaaaatggctgctctattcttagttgttcctttacagatgat
agcaatgcttatatctgtgttgggactgcatatgttttgcctgaagagaatgaacccagc
aagggtcggatacttgtttttgtggtggaagatgggaagttaatgctggtagcagagaaa
gaaactaaaggggcagtgtatagtttaaatgccttcaatgggaaattattggcagccatc
aaccaaaagatacagctctacaaatggatgctcagagatgatggttcacgtgagctgcag
tcggaatgtgggcaccatggacatatacttgctctctatgttcaaactcgtggagacttc
attgtagtgggtgaccttatgaagtctatatccttgttgatttataagcacgaggagggt
gcaatcgaggagcgggcccgtgactacaatgcgagctggatgacagcggttgagatactt
gatgacgacacctaccttggtgctgagaacaactttaacctctttactgtgcgcaagaac
agcgatgctgcgacggacgaggagcgtggccgcctcgaggtcataggagaatatcacctt
ggtgagttcgttaaccgcttccgccatggatccctcgtcatgcgacttccggactccgaa
tcctcccaaatacccaccgtcatttttggaactgttaatggcgcgatcgggattgtcgcc
agtctttctcagcaccaattcaagtttttcgagaaattgcaaggttgtcttgttaaggtg
atcaaaggagttgggggcctgagtcatgagcagtggcgctcatttaacaatgagaagaag
acagcagatgcacgggggtttcttgatggggacctcattgagtcgttcctcgatttgagt
agggccagaatggaggagatatcaacagccatgagagttcctgtggaggagctatgcaag
agggtcgaggaaatgactagattgcattga

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