Amborella trichopoda: 18423761
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Entry
18423761 CDS
T02990
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
atr
Amborella trichopoda
Pathway
atr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
18423761
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GFIT
Motif
Pfam:
Sel1
TPR_16
Motif
Other DBs
NCBI-GeneID:
18423761
NCBI-ProteinID:
XP_006828421
UniProt:
W1NJ83
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MPRRSSPLILAFVIVALLFLFPLHCLARHFVLVLEKDDLKDNPSPENSDDQFSGDESAGD
SIEWDEFGDSDSKSEEELDPGSWRPILESSDSFARNFTPESDDGLYFSGLGKLINGVSKG
EVELVEEAAKEFVVASNGGHAHAQSVLGFLYGLGIGVKRSDSKAFLYHSFASAGENMQSK
MALAYTYFRQELFENAVELYAELAETAVASFLISRDSPIVEPVRINDGSEENKEALRKSR
GEEDDDFQIMEYQALKGNAAAMYKLGLFYYFGLRGVRRDHAKALSWFLKAVEKGEPNSME
LLGEIYTRGAGVPRNYTKALEWLTLASKQKHFSAYNGIGYLYVKGHGVEKKNFTKAREYF
ERAAKNDEPSGHYNLGVLYLKGIGVKKDVRVASRHFLTAANFGQPKAFYQLAKMFQKGIG
FKKDLALAATLYKIVAERGPWGSLSRWALEAYLKGEIGKALLLYLRMAELGYEVAQSNAA
WILDKYGERSLCIGESGFCTAAERHQRAHSLWWHASEQGNEHAALLIGDAYYYGRGTERD
FERAAEAYTHAHSQSNAQAMFNLGYMYEHGQGLPLDLHLAKRYYDQALENDPAAKLPVTL
ALMSIWIRKNHAGSFMVEIIDSLPEMYPKFGAWIETNIMDEGNATIITLFICLLTVLYLR
ERQRRQAVVPPPPADNIAG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtcgatcttctccattaattttagcattcgtgatcgtagccctcctcttcctc
ttccccctccattgtcttgctcgacacttcgtccttgtcctcgagaaggacgacctcaaa
gataacccgtcgccagaaaactccgacgaccaattttccggggatgaaagcgccggagat
tcgattgaatgggatgaatttggagattcggactccaagtcagaagaagagctggaccct
ggctcttggagaccaatcttagagtcatcggattcatttgcccggaattttaccccggaa
tctgacgacgggttgtacttttccggcttggggaaactgattaatggggtttccaaagga
gaggtggagcttgttgaggaagcggccaaggagtttgttgttgcttctaatggtgggcat
gcgcatgcacaatccgttttagggtttctctatggattgggaattggggtcaagcgcagt
gattcaaaggcttttctatatcatagttttgcttctgctggtgagaatatgcagtcaaag
atggctctggcttatacttacttcagacaagagttgtttgagaatgctgttgagctctac
gcggaactagcagaaactgcagtggctagctttctcatttcaagagactcacccattgta
gaaccagtcaggattaatgatggttctgaagagaataaggaggcactgcgaaaatctcgt
ggggaagaggatgatgatttccagataatggaatatcaggcactaaaagggaatgcagct
gctatgtataaacttggcctcttctattattttggcttgagaggggtaaggcgtgatcat
gcaaaggccttatcatggtttttgaaagcagttgagaagggcgagccaaattctatggaa
cttcttggagaaatatatactagaggagctggagttccgaggaactataccaaggctttg
gagtggcttacacttgcatccaagcagaaacatttttctgcctataatggcattgggtac
ttgtatgtcaaaggccatggagtggaaaagaagaatttcacaaaggccagagaatatttc
gagagggcagcaaaaaacgatgaacctagtgggcattataacttgggagttctatatctt
aaaggcatcggtgtgaagaaagatgtgagggtagctagcaggcatttcttaacagctgcc
aactttggacaaccaaaggcattttaccaattagcaaaaatgttccagaaaggaataggc
ttcaaaaaggatctagcattggcagcgacattgtacaaaatagttgctgagcgaggacct
tggggttccttatctcgttgggctcttgaagcatacttaaagggtgaaattggtaaagcg
ttactgttatacttgagaatggctgagctgggatatgaggtggcacaaagtaatgctgca
tggattcttgacaaatatggggaacgaagtttgtgtattggggagtcaggattttgcaca
gctgctgagaggcatcagcgtgcacattctttgtggtggcatgcttcagagcagggtaat
gagcatgctgcacttctcatcggggatgcctactactatggccggggaactgaaagggat
tttgagcgtgctgctgaggcctacacgcatgcacattctcaatctaatgcacaggctatg
ttcaaccttggatacatgtatgaacatggccaagggcttcctcttgatcttcatttagca
aaacggtactatgatcaagccttagaaaacgatcctgctgctaagctgcctgtcaccctt
gctcttatgagcatctggataaggaagaaccatgctggtagttttatggttgaaataata
gattcacttcctgaaatgtatcccaaatttggggcatggattgagacgaacatcatggat
gagggtaatgctaccatcattactctgtttatctgccttttgacagtcctctacctcaga
gaacggcaacgacggcaagcagttgtcccacctccccctgctgataacattgctggttaa
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