Amborella trichopoda: 18423789
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Entry
18423789 CDS
T02990
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atr03000
]
18423789
04121 Ubiquitin system [BR:
atr04121
]
18423789
Transcription factors [BR:
atr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
18423789
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
18423789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
18423789
NCBI-ProteinID:
XP_006828449
UniProt:
W1NKX5
LinkDB
All DBs
Position
Unknown
AA seq
1234 aa
AA seq
DB search
MSPGVGSRNEGRGWRGEWVPRTRNPNPSPSPSPSSETRNPESVLNLISTREYAGSDRFGF
GNSTGYQSSDRFDVRNLRNQVNPDRLDARNSRNYRNSDRFDLRISRDRPNSDRSDTRNSR
DYQNPNQVNSGSPRIGDQTGGASAPVVYSGGSDLGFESRRVQCDSSIRGQQRGDFARECV
ERGVLGVNPSGSHPRVHGNSRFRQSSGGFSKELERERRTAHGGRKDVERQRQIEKGRSHE
LTISHVPQLVQEIQEKLTKGAIECMICFDVVGRSASIWSCGSCFSIFHLNCVKKWAKAPT
SVDLSVETTQGSNWRCPGCQSVQMATPEELRYTCFCGKRRDPPSDFYLTPHSCGEPCGKA
LDKIPNPLCPHLCVLQCHPGPCPPCKAFAPPQPCPCGKTTLTRRCSDRKSVPSCGQPCGK
LLGCGRHYCEEACHVGPCNSCEFLLNALCFCGKKEHALLCGEMGIKGELGSFSGIFSCGG
LCRKLLSCGNHQCEKSCHPGECGECELVPWKMKTCPCGKTQLLNTRKSCLDPILTCSKAC
ERTLPCGHHSCEASCHEGACPPCQILVTQKCRCGSSSRTVPCYKTMIPSDQDGFLCDKSC
GHKKNCGRHRCNERCCPLSNPKGREEPYSFDWDPHLCQMICGKKLRCGQHTCGILCHSGH
CPPCLETIFTDLSCACGKTSISPPVPCGTLPPSCQHPCSVPQPCGHPASHSCHFGDCPPC
TVPIAKECVGGHLVLRNIPCGSRDIRCNKLCGKTRQCGMHACARTCHPSPCDPPPSGDSL
SGVSGDLFSRRSCGQVCGAPRRDCRHTCAAECHPGQLCPDQRCNFQVTITCNCGRISSSV
PCSAGGSSVYVDTVYEASVAEKLPVPLQPIDSSTSSGRVPLGQRKFICDDECAKLERKRV
LADAFEISTNVDALHFGESAAVSEYLTDLMRRDPKWVMAIEERCKYLVLGKGKGSPNSIR
VHVFCAAPKEKRDAIRQIAERWKLSIHAAGWEPRRFLVVHVTPKSKPPARILGFRGGSVP
AAIGQQAPPFDSSIDMDPRLVVALFDLPRDSDVSALILRFGGECELVWLNDRNALAVFGE
PARAATALRRLDHGSAYIGAVVLQNVGSLSLNAWGVRDGGNFGVKANAWKKAVPETGWLE
DSWGEEWSSGEASQPGWKTKEKPIMASRNPWNVLDKEVGSSQRSSLVPQISESSQISESK
AEASLSLSLSGVSHTGQSNGGEPEEVEDWEKAYE
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgagccccggagtcggaagcagaaatgaagggaggggctggcgcggggaatgggtccca
agaaccagaaaccctaacccaagccctagccctagccctagctctgaaaccagaaaccct
gaatcagttttaaatttgatcagcacgagagagtacgctggttctgatcgattcggtttt
ggaaactcaacagggtatcagagttctgatagatttgatgtgaggaacttgagaaatcag
gtgaatcctgatcgacttgatgccagaaactcgagaaactaccggaattctgatcgtttt
gatttgagaatttcaagagatcgccctaattctgatcgatctgataccagaaactcaagg
gattaccagaatccaaaccaagttaattctgggagccctagaataggtgatcagactggt
ggtgcttctgctccagtggtttactctggtggttcagatttagggtttgaatcaagacgt
gtccaatgtgatagttccattcgtggtcaacagagaggtgattttgcaagagaatgtgtg
gagaggggcgtacttggtgttaatccttctggttctcatcccagagtacatggaaacagc
agattcaggcaaagcagtggaggattttcaaaggagctagagagagaaaggcgcacagct
catggaggcaggaaggatgtagagagacaaaggcagatagagaaaggaagatcacatgaa
ctgaccatctctcatgtccctcaactggtgcaagagatacaagagaagctcaccaaaggt
gcaattgaatgcatgatatgcttcgatgtggttggaaggtcagcttcaatctggtcttgt
ggtagttgcttctctatctttcatctcaactgtgtgaaaaagtgggcaaaagctcctaca
tctgttgatttatcagtcgaaacaacgcaaggatcgaactggagatgccctgggtgccaa
tctgttcaaatggccacgcctgaagagctaagatacacttgtttttgtggtaaaaggaga
gatccaccttctgatttctacctaactcctcactcttgtggagaaccatgtggaaaagcc
cttgataaaatcccaaaccctctatgtcctcacctctgtgttcttcaatgtcaccctgga
ccttgccctccttgtaaagcctttgctcctcctcagccatgcccatgtggaaagacaact
ctaacaaggaggtgctctgatagaaagtcggtgccttcgtgtgggcaaccatgtggtaag
cttctggggtgtgggcggcattactgtgaagaagcttgccatgttgggccctgcaattct
tgtgagtttttgcttaatgccttgtgtttttgtggaaagaaggagcatgctctcctttgt
ggagagatggggattaagggtgagttgggttctttttcggggatcttttcttgtgggggt
ttgtgtagaaagctgctttcttgtggaaaccatcagtgtgagaagagttgccatccagga
gagtgtggggaatgtgaattggtgccatggaagatgaagacttgcccttgtggaaagacc
caattgctgaatactcgaaagagttgcttggatcctatactaacctgctcaaaagcttgt
gaaaggacattgccttgtggccatcactcttgtgaggcctcatgccatgaaggggcatgc
ccaccttgccaaatactggttacccaaaaatgtcggtgtgggtcttcatctagaacagtt
ccttgctacaaaaccatgataccatctgatcaagatggtttcctttgcgacaaaagttgt
gggcataagaagaattgtggtagacacaggtgcaatgagaggtgttgccctctctcaaat
ccaaagggtcgagaagagccttattccttcgattgggacccccatttgtgccaaatgatt
tgtggcaaaaagcttaggtgtgggcaacacacctgtggtattctatgtcatagtggccat
tgcccaccttgccttgaaactatattcactgatctctcttgtgcatgtggaaagacctcc
atatcccctccggtgccctgtggtaccctgccaccctcttgccaacacccatgttcagtg
ccccaaccgtgtggccaccctgcctctcatagttgtcattttggtgactgccctccatgc
actgtacccatagcaaaggaatgtgtaggggggcacctggtactaagaaacataccatgt
ggatctcgtgatattcgatgcaataagctttgtggaaagactaggcaatgtggcatgcac
gcttgtgcaagaacttgtcatccttccccttgcgatccacctccttccggtgattcactc
tctggggtttcgggtgatttgttctctaggagatcttgtgggcaagtgtgtggggctcct
aggagagattgcaggcacacatgtgctgctgagtgccatcctggtcagctttgccccgat
caaagatgcaattttcaggtgaccatcacttgtaactgtggtagaatttcatcttctgtt
ccttgtagtgcaggtggtagttcagtttatgttgatactgtctatgaagcctctgtagcc
gaaaagttgcctgttccccttcaacccattgatagttctaccagctctggtagggtacct
cttgggcaaaggaagttcatttgtgatgacgaatgtgcaaaattagagagaaagagggtt
ttggctgatgcttttgagatatcaacaaatgttgatgcacttcattttggtgagagtgca
gccgtttcagagtaccttacagatttgatgaggagagatccgaagtgggtcatggccata
gaggagagatgcaagtatttggtgttgggtaagggcaaagggagcccaaatagcattaga
gtgcatgttttttgtgctgccccaaaggagaaaagggatgcaattaggcaaatcgcggag
agatggaaacttagcatccacgctgctggatgggaaccacgtcgattcctcgtggtacat
gtaactccaaaatctaagcctccagctcggattctaggttttagagggggatctgtccct
gctgcaatagggcaacaagccccaccctttgattcatcaatagacatggacccaaggctt
gtggttgcgttgtttgatttaccaagggattcagatgtaagtgctctgatacttaggttt
ggtggagaatgcgagcttgtgtggttgaacgataggaatgctttagctgtttttggtgaa
cctgcaagagcagcgactgctcttaggcgcctagaccacggttcagcctacattggagct
gtggttttgcaaaatgttggttctttgagtttgaacgcttggggggttcgggacggtgga
aactttggggttaaggccaatgcttggaagaaggctgttccagaaacagggtggttggaa
gattcatggggtgaggagtggtctagtggtgaagcttctcagcctggatggaaaactaag
gagaaaccgatcatggcctcgaggaatccatggaatgtgcttgataaggaggttggtagt
tcacagaggagtagcttggttccacaaatttctgaaagttctcagatttctgagagtaag
gcagaggcttctttgagtttgagtttgagtggagtgagtcatactgggcaaagtaatggg
ggggagcctgaggaggtggaggactgggagaaagcttatgagtga
DBGET
integrated database retrieval system
