Amborella trichopoda: 18423869
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Entry
18423869 CDS
T02990
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18423869
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
18423869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
18423869
NCBI-ProteinID:
XP_020531796
LinkDB
All DBs
Position
Unknown
AA seq
1590 aa
AA seq
DB search
MEAAATNPRTAKLPPRQNSRAALQDLFNLYLGRSYRNKGDDEAPRETPTKLQKRISALNR
ELPPRNEQFLFDFEQLQAQFPDQEHLRSVTESVIINLVVQCSSHAPQAEFLLFSLRALSD
IGYINWDTFIPSLLSSVSSAEISVGQGNQAMTANNLAAHGNTPSSVAISTSTSFQSFNPS
SPLPSLQGMGSPPQGSTDLAASVTQSPKPNDTGQQIGPRTNGSLRRTAFSWLRQLSCKII
LIALECNLKPLTHAEIFQHMLNWLASWDQRQDGVEEFEVRLHEWLHSCLDVVWVLVEEDR
CRIPFYELLRSGLQFMDNIPDDEALFTMVLEIHRRRDKVAMHMQMLDQHLHCPTFANLRF
PAQTYPSLSGEPLANLRSAPLTYPSGLGEPLHGEDLAACIQRGSLDWERAIRCLKHALNT
TPSPDWWRRVLVTAPCYRQQAQQQVSVPGIVFSSEMLCEVIIDRIMDLLKSSNSDNQAWQ
EWLIFSDLFHLVMKSGYIDFLDFVEKLTSRFAKGNQQIRSNHVTWLLVQIISTEIVMNTL
NADPKKVDTMRKIVSFHKEDRSSDQNNVTPQGILLDFISSSLTSRVWSLTASIREYLNPE
QLQKGKQIDEWWKQVKGERMLDFLNLDERSLGMFWVLSHTVGRTAWEAIMAYLNSVGVSE
LLQQGSMGQSGERMMVMREACPLPMSLFSGLSINSSLKLATQIEETLLFGQVIPSIAVVE
TYARLLLTLPHSLFRLHFNVLTQRAQTITNKPGVYLLLLEILNYRLLPLYRYHNKTKTLM
YDVTKIISMTKAKRGEHRLFRLAENLCMNLILSIRDVFLVKKELKGPTDFTETLNRVAII
SLAITIKTRGIAEIEHLLFLPPLLEQIMATSQHTWSEKTLRHFPPLVRDCLMGRMDKRSQ
AIQAWQQAETTVINQCRQLLSPSVDPSYVVTYINRSFPLHRQYLCAGTWMLMTGHPESIN
SANLGRVLRELSPEEVTSNIYTMVDVLLHHIQIELQHGHVIQDLLINASVNLTFFIWTNE
LLPLDILLLALTDRDDDPHALRLVVSLLLDRQDFQQRVKVFCMNRGLPEHWQNSGPLKRL
ELQKALGNHLSGKERYPTFFDDIVARMLPVIPLIIYRLIENDATDTADRVLATYSAFLAY
HPLRFTFVRDILAYFYDHIPSKLIVRILNVLDYPKIPFSESFPQHIGPSNSGICPPPEYF
ASLLLGLVNNVIPPLNSKTRSGSTGDMTGSSSRSVPNKTQTTQSMPMSPMDGQKAFYQIQ
DPGTHTQLVLETAVIEILSLPVTASQIVSSLVQIVVHVQPTLIQSTTGVQGAGQSSGLPT
SPSGGSTDSLNTTRSAASSTGISTSNFVSRSGYTCQPLSCLMIQACGLLLSQLPPAFHVQ
LYAEASRIIKDCWWLTDTSKSSRELDSAVGYALCDPTWAAQDNTSTAVGNTVALLHSFFS
NLPQEWLEGTHAIIKHLRPVTSVAMLRIAFRIMGPLLPRFAFARQLFMKTLALLFNVMAD
VLGRNSQLSTPTEFAEISDLIDFLHHAVISEGQGTVQSNTKPRPETLTLCGKAVEMLRPE
LQHLLCHLKPDPNSSVYAATHPKLAQSSNQ
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagcagcaacaaaccctagaaccgccaaacttcctccccgacagaattcgagg
gcagcgttgcaggacctcttcaacctttaccttgggaggagttatagaaacaaaggagat
gacgaagctccaagagaaaccccgactaaattgcagaagagaatatctgctttgaataga
gagcttccacctcgaaatgaacaatttctttttgactttgaacagcttcaggctcaattt
cctgatcaggagcatctacgatctgtgacagaatctgtgattattaatttggtagtgcag
tgtagcagccatgcaccacaagcagagtttctgctattctccttgcgtgctttatctgat
attggttatataaattgggatacatttattccttcccttctctcttctgtttcctcggca
gagatatcagttgggcaaggaaatcaagcaatgacagctaacaatttggcagcacatgga
aatacgccatcttcagttgcgatttcgacttccactagttttcagtccttcaatccttcc
tccccactgccttcacttcaaggaatgggttctcctccccaaggttctactgaccttgca
gcaagtgtaactcagtcacctaaacctaatgacacaggtcaacaaattggacctaggaca
aatggatcactgaggcgtactgcctttagctggctacgccagctgtcatgcaagataata
ttaattgcacttgaatgcaatctaaaacctcttactcatgctgagatttttcaacacatg
cttaattggttggctagttgggatcagagacaggatggtgttgaggaatttgaagtgaga
ttacatgagtggctgcatagctgcttagatgttgtctgggttttggttgaggaagacaga
tgccggataccattctatgagttacttcgcagtggcttacagtttatggataatatacct
gatgatgaggccctgtttactatggtccttgagatacataggagacgcgataaggttgca
atgcacatgcagatgcttgatcaacaccttcactgccccacttttgccaatcttcggttt
cctgctcagacgtatccaagtctttcaggggagccattggcaaacttgcgttctgcacct
ttaacatatccaagtgggctaggggagccattgcatggagaggaccttgctgcatgtata
caaagaggaagtctagactgggaaagagccatccgttgcctgaagcatgctcttaataca
actccttctccagattggtggcggcgagtgcttgttactgctccttgttacaggcaacaa
gctcaacagcaagtttcagttcctggaattgtattttcttcagaaatgctatgtgaggtg
atcattgataggattatggatcttttgaagtcttccaactcagataatcaagcctggcaa
gagtggcttatattttcagatttatttcaccttgttatgaaaagtgggtatatcgatttc
cttgactttgtggaaaagcttacatctcgatttgcaaagggtaatcagcagattcggagt
aatcatgttacatggttgcttgtgcaaattatctcaacggagattgtcatgaatactctt
aatgcagatccaaagaaggtggacaccatgcgaaagattgtctctttccataaggaagac
cggagttctgatcagaataatgttactcctcaaggtatcctacttgatttcatcagcagc
agcctaacttcgcgtgtttggtcattgaccgcttctatcagagaatatttgaaccctgag
cagctgcagaaagggaagcaaatagatgaatggtggaaacaagttaaaggtgaacgtatg
ctggattttctgaatttggacgaaagatcattgggaatgttttgggttctttcgcatact
gtgggacgaactgcctgggaagcgatcatggcttatttgaactctgtgggagtcagtgag
cttttgcaacagggatccatggggcagtctggtgaaagaatgatggtcatgcgagaagca
tgtccattgccgatgtcattattttctggcttgtccattaactcaagtttgaaattggca
actcaaattgaagaaaccttactctttggccaggtgataccaagcattgcagtggtggag
acatatgctagattgctgctgactcttcctcactcgttatttcgacttcacttcaatgtt
ttaacacaaagagcgcaaactataaccaacaagcctggggtgtacttactactgctggaa
atactaaattatcgactacttccactatataggtatcataataagactaaaaccctgatg
tatgatgttacaaagataatttctatgacaaaagcgaaacgtggagaacatcgtcttttc
aggctcgctgagaatttgtgcatgaatctaattctttccatacgagatgtttttctagtg
aaaaaggaactaaagggtcccactgattttactgaaacattgaatcgggttgcaattatc
agtcttgcgattacaataaagacgcgtggaattgcggagattgagcacttgctctttttg
ccaccattgttagaacaaataatggccactagtcagcatacttggtctgagaaaacattg
cgccatttcccacctcttgttcgtgattgcttaatgggaaggatggataaacggagccag
gctatccaagcttggcagcaggcggagacaactgtcattaatcaatgtaggcagctccta
tctccttctgttgatccatcttatgtcgtgacctacatcaaccgcagttttcctctgcat
cgtcaatatctttgtgcgggaacttggatgcttatgaccggacaccctgaaagcattaat
agtgcaaatcttggacgtgttctgagggaactgtcacctgaagaagtgacctcaaacatt
tacacaatggtggatgttcttcttcaccacattcagattgaactgcaacatggtcatgtc
attcaggatctcctaatcaacgccagtgtaaacctcactttttttatctggacaaatgaa
ctacttccattggatattttgctcttggctctcactgatcgggatgatgatcctcatgct
ttgcgccttgtggtgagtttgcttcttgacagacaagatttccagcaaagagttaaagtt
ttttgtatgaatcgtgggcttccagagcattggcagaactctggtcctttgaagcgactt
gagctacagaaagctcttgggaaccatttatccggaaaggaaaggtatccgacgtttttt
gatgatattgtggcacgcatgttgccagtcatcccactgatcatttatcggcttattgaa
aatgatgcgactgatactgcagacagagttcttgccacttattctgcatttcttgcgtac
cacccactgaggttcacatttgtgcgtgacattcttgcgtatttctatgatcatattcct
agcaaactcattgtccgaatactgaatgtacttgattatccaaagattcctttttcagaa
tcattccctcaacatattggtccatcgaattctggtatatgcccaccacccgaatatttt
gcaagtctgcttttgggccttgtaaacaatgttataccacctctgaacagcaagacaaga
tcgggatctacaggagatatgactggtagctcttcacgctctgtgcccaacaaaacccaa
accactcagtccatgcccatgagtcctatggatggtcagaaagccttctaccagattcaa
gatccaggaactcacactcaactagttcttgaaactgcagtcattgaaatcctttcactc
ccagtaactgcttctcaaattgtatcatcacttgtccaaatagttgtgcacgtccagcca
actttgattcaatctaccacaggagttcaaggtgctggacaaagctctggtctaccaact
tctccatcaggtggtagcactgattccttgaacacaaccagatcagctgcatcctcaact
ggaatcagcacctccaattttgtttctagaagtggttatacatgccaaccactatcgtgt
ttgatgattcaagcttgcgggctgctattatcgcaacttccaccagcttttcacgtgcaa
ttatatgcggaagcatcacgtataattaaagactgttggtggcttacagatacatcaaag
tcatccagggaacttgattctgcagttggctatgccttgtgtgatccgacgtgggctgct
caagataacacctcaactgcagttggcaacacagttgcactgctgcattcattctttagt
aacctccctcaagagtggcttgaaggcacgcatgcaattataaaacatctcaggcctgta
acttctgttgccatgctgagaattgcatttcgtataatgggcccactgcttcctcgcttc
gcatttgcacgccaactcttcatgaagacactggccttgctattcaacgtgatggcagat
gtcttggggagaaattctcagctgtcaactcccaccgaatttgcagaaatatcagatctc
atagatttcttgcaccacgccgtaatttctgaaggacaagggactgtgcagagcaacacg
aagcctagacctgagacactgactctgtgtggcaaagcggtagaaatgttaaggccagag
ttgcagcatcttctttgccacttgaaacccgacccaaactcctcagtttatgcagcaacg
catcctaaactggcgcaaagttcaaaccaataa
DBGET
integrated database retrieval system
