Amborella trichopoda: 18424054
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Entry
18424054 CDS
T02990
Name
(RefSeq) ubiquitin domain-containing protein DSK2b isoform X1
KO
K04523
ubiquilin
Organism
atr
Amborella trichopoda
Pathway
atr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
18424054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18424054
03051 Proteasome [BR:
atr03051
]
18424054
Membrane trafficking [BR:
atr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
18424054
Proteasome [BR:
atr03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
18424054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
TBK1_ULD
UBA_7
STI1-HOP_DP
Dsc3_N
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
18424054
NCBI-ProteinID:
XP_011628832
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MVADGESGESSDLSHEIVSVHIRCSNGSKFTVQVDLSSSVSAFKALVAETSDVPAQQQRL
IYKGRILKDDQTLISYGLQADHTVHLVRGAAPASAANTTPSSNVPSNAPVRGLAFLEGGA
SGGAGLGGLHLPSLGINGPGGNGGANLFGVGLPEFEQAQQQLTQNPNMMREIMNIPVIQN
LMNNPDLMRNLIMSNPQMREIIDRNPDLAHILNDPSTLRQTLEAARNPELMREMMRNTDR
AMSNIESSPEGFNMLRRMYETVQEPFLNATTMAGDGGNDLGSNPFAALLGNQGAGQPRDR
SHNPSTTGSEATTGSPVPNTNPLPNPWSNATGAQTNGTAARTSPGGDARAPGTGGLGGLG
LPDLMAGGLQDSSLLNQMMQNPAMTQIMQSLLSNPQYMNQILGANLQNDSPLRQMMQNPE
FMRQMTSPETMQQMLSLQQALMSQIGRQSTGQGQGQAGTGAGAPNNAGLDSLLAMFGGLG
GGGLSVSNTANVPPEQLYATQLSQLQEMGFIDIQENIRALNATAGNVHAAIERLLGNLG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggatggagagtctggggaatcgagcgatctctctcatgaaatcgtgagcgtt
cacatcagatgttcgaatggctccaagttcactgttcaggtcgatctgagctccagtgtc
tcagcgttcaaggccctggttgctgagacttccgacgtaccagcacagcaacaacgcctc
atctacaagggtcgaatcctgaaagatgatcaaaccctaattagttatgggttgcaggca
gaccatactgttcatctggttcgtggcgctgcaccagcttcagcagctaatacaacacct
tcatccaatgtcccgagtaacgcaccagttagggggcttgcttttcttgagggtggagct
tcaggaggtgctggccttggaggtcttcacttgcctagtcttggcatcaatgggcctggt
ggaaatggaggtgctaatttatttggtgttggactccccgaattcgaacaggctcaacag
caactcacacaaaaccccaacatgatgagggagataatgaacataccagttattcaaaac
ctcatgaacaatcctgatctaatgcgtaacttgatcatgagcaatcctcagatgcgagag
ataattgataggaaccccgaccttgctcatatacttaatgacccaagcactctacgccag
acccttgaagcagctaggaaccctgagcttatgcgtgagatgatgagaaacacagatagg
gctatgagcaatatcgagtcatcaccagaagggtttaatatgctcaggcgtatgtatgag
actgtgcaagaaccgttcctcaatgctaccactatggcaggggatggaggaaatgacttg
gggtcaaacccatttgccgctttgttggggaaccaaggtgctgggcagcctagggatcgt
tcacataatccctcaactactggttcagaagcgacaacaggatccccagttccgaacacg
aatccgctaccgaacccatggagcaatgccacaggtgcccagactaatggcacagctgca
cggacaagccctggaggtgatgcaagggctcctggcacaggtgggctgggagggcttggt
cttccagatttgatggctgggggcttgcaggattcctctttattgaatcagatgatgcaa
aacccagcaatgacgcagataatgcaaagcctcctctctaacccccagtatatgaaccag
attctgggtgccaatctccaaaatgattctcctctaagacaaatgatgcagaacccggaa
tttatgcgtcaaatgacttccccagagacaatgcagcaaatgctgtcattgcagcaagca
ctcatgtctcagattggcaggcaatcaaccggccagggacaaggccaggctggcactggt
gctggtgcccccaacaatgcaggattggattcattgctggccatgtttggaggtcttgga
ggtggtggcctaagtgtttcgaacacagctaatgtgcccccagaacagctttatgccaca
cagctatctcagcttcaagagatgggtttcattgatattcaggagaacattcgggcattg
aatgccacggcaggcaatgttcatgctgctatagagcgccttttgggaaatctcggttag
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