Amborella trichopoda: 18424129
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Entry
18424129 CDS
T02990
Name
(RefSeq) long chain base biosynthesis protein 2a isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
atr
Amborella trichopoda
Pathway
atr00600
Sphingolipid metabolism
atr01100
Metabolic pathways
Module
atr_M00094
Ceramide biosynthesis
atr_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
18424129
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atr01007
]
18424129
Enzymes [BR:
atr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
18424129
Amino acid related enzymes [BR:
atr01007
]
Aminotransferase (transaminase)
Class II
18424129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-GeneID:
18424129
NCBI-ProteinID:
XP_006828786
UniProt:
W1NK89
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MITIPYVTALTTLFSYGLLFVFGQFRDLFRKLWRRISSKKELYAPIVLENEDFYTRRLYL
RIQDCFGRPISSAPDSWFDLVERYSTDCNKTLIRTSKTRRCLNLGSYNYLGFASSDEYCT
PRAIESLKRYSPSTCSNRVDAGTTNLHTEVEELVASFVGKPSAVVFGMGYATNSAIIPVL
IGKGGLIISDSLNHSSIVNGARGSGATIRVFRHNTPLHLEEVLREAIAEGLPRTHRPWKK
IIVIVEGIYSMEGELCQLPEIVAVCKKYKAYIYLDEAHSIGAVGKSGRGVCELLGVDPAD
IDVMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSMSPPAVQQVISAIKVILGE
DGSNRGAQKLVRVRENSNFFRSELKKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRGCLEE
DVAVVTVAFPATPLLLARARICISASHTREDLIRGLEVISQIGDLIGIKYLPMEPEKQHL
EDREKLE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgattacgattccttatgtaacagcgttaacaactctgtttagctatggtttgctcttt
gtatttggccagtttagagacctgttcaggaaactatggagacggatctcgtccaagaaa
gagttgtatgcacctattgtcctagagaatgaggatttctacacgcgccggctttatctt
cgcattcaggactgttttggacgcccaatctcaagtgcacctgattcttggtttgatttg
gttgagcgttactcaacagactgtaacaaaacgctaatacggacttcaaaaacaagaaga
tgccttaacttgggttcctacaattatcttggatttgcatcctcagatgagtactgcaca
ccacgtgcaattgagtcattgaagagatattcacctagcacttgcagtaaccgtgttgat
gccggcacaaccaatttgcacacagaagttgaggaattagttgctagttttgttgggaag
ccctcagctgtggtctttggcatgggctatgcgacgaactcagccattattcctgtcctt
attggaaaggggggattgataattagtgactcattgaaccatagttctattgttaatggt
gctcgtggatcaggtgctacaattagggttttccgacacaatacaccattgcacttggag
gaagttctaagagaagcaatagccgaagggcttccaagaactcatcgaccatggaaaaag
ataattgtgattgtagaaggaatctatagcatggagggggaactctgccaacttccagag
atagtagcagtctgtaagaaatataaggcctacatatatctagatgaggctcacagcatt
ggagcagttggtaagtcaggaagaggggtttgtgagctccttggggtggatcctgctgat
attgacgtcatgatgggaactttcaccaagtcttttggatcatgtgggggatacattgct
ggatccaaggaactcattcaatatttgaagtatacgtgtccagcacatctatatgcaaca
tccatgtcgccacctgctgtacaacaagttatttctgccattaaagtcattctaggagag
gatggttctaatagaggggctcagaagcttgtgcgagtacgtgagaacagcaattttttc
agatcggaactaaagaagatgggatttgaggttttgggtgataatgactctccagtaatg
ccaataatgctttataatccggcaaaaattccagccttctctagggggtgtcttgaggag
gatgttgcggttgtgacagttgcattccctgcaacgccattgcttctggcgagggctcgt
atctgcatatctgcctcccacacaagggaagacctgattagaggactggaggtcataagc
caaatcggtgacctaattggcataaagtatctaccaatggagcccgagaaacaacattta
gaggatagagagaagctggagtga
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