Amborella trichopoda: 18424232
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Entry
18424232 CDS
T02990
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
18424232
Enzymes [BR:
atr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
18424232
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
18424232
Prokaryotic type
18424232
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
18424232
NCBI-ProteinID:
XP_006828885
UniProt:
W1NLE6
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MAFTLEPLQLDAPKPPSPKRLKMTPSTTDDENASAPKKRFKKRKIAIFLAYCGVGYQGMQ
RNPGAKTIEGDLELALFRAGAIAESDFGDPRRVDWMRSARTDKGVSAIGQVVSGRFFIDP
PGMISRLNAHLPEQIVALGFKRVTSSFNAKKFCDRRRYVYLLPVFALDPSAHPDREAVAA
SLGSDNELVKCTECSERGRKVPGVMGHGDGRVTVSGDKVKVSESNGDAAQIRENNEGGGD
QHTVSEENGSGAQIRFTDDDDGGAGEIRVSEEERGACEIKVSEGDGGSNETRVNRRTIET
KVSEDEVVGASGLEIKGSEVETRVSENDAGFTALGTDNGVQGELYENRNGVSLSDSREGN
GKNLQHRVSVDSSLKNETETEIHITGDQPRDGDLSNGVTTDNTGFIYSEEVKERFNKILK
QYVGTHNFHNLTTRTKAECPSAFRYILSFEANEVVTVDGIDFIKCVVLGQSFMLHQIRKM
VGLAVAIMRGCAPDSMIATALRKDLRINVPTAPELGLFLDECLYTSYNQKWSDSHEELSL
KDYAVQAEEFKMKHIYSHIASTEHKEGLVALWLHSLNQRNYPDFQMAGIDGGGGSESIAV
LKGEAVG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcctttactctagagccgctgcaactcgatgcccctaaacctccaagccctaaacgc
ctcaaaatgaccccttccaccacagatgacgagaacgcatcagctcccaagaaacgcttc
aaaaaacgcaaaatcgccattttccttgcttactgtggtgttggctatcaaggcatgcag
agaaaccctggcgccaagaccattgaaggtgacctcgagctcgccctctttagagcgggc
gcaattgccgaatctgacttcggtgacccgcgtcgagtagattggatgagatcggctcga
actgacaaaggagtgagtgccatcggccaagtggtttcaggacgttttttcattgatcca
cctggtatgatctcgcgccttaatgctcatcttcctgaacaaattgtggctttagggttt
aagagagtcacttcttcgtttaatgcaaagaagttctgtgatcgaagaaggtatgtgtat
ttgttgcctgtttttgctcttgatcctagtgcgcaccctgatagagaggcagtggccgcg
agcttgggttcagataatgagcttgtgaagtgtactgagtgttcagagcgtggacgcaag
gtgcctggtgtcatgggccatggcgatggtagggttacggtttctggtgataaggttaag
gtttcagagagtaatggggatgctgctcaaattagggaaaataatgaaggtggtggtgac
cagcacacggtttctgaggaaaatggaagtggtgctcagattaggtttactgatgatgat
gatggaggcgcaggtgaaattagggtttctgaagaagaaagaggtgcctgtgaaattaag
gtttctgaaggtgatggaggatctaatgaaactagggttaatagacgtactattgaaact
aaggtttctgaagatgaagttgtaggtgcttcgggccttgaaattaagggttctgaggtg
gaaactagggtttctgagaatgatgctggtttcactgcattgggaactgacaatggtgtt
caaggtgagctctatgaaaatagaaatggtgtttctctttcagacagtagggaaggaaat
ggtaagaacctgcagcacagggtgtctgtagactcttcattgaaaaatgaaactgaaact
gaaatccacatcacaggcgatcaacccagagatggggatctatcaaatggagtgaccaca
gacaacactggtttcatttacagtgaggaggtaaaggagagatttaacaaaattctcaag
caatatgtggggactcacaatttccataatttgacaactcgaaccaaggcagaatgtcca
tctgcttttcgatacattttatcatttgaagcaaatgaagttgttacagtggatggtatt
gatttcatcaagtgtgtggttttgggtcagagcttcatgctccaccaaattcgcaaaatg
gttgggcttgctgtggccattatgcgaggatgtgctcctgactccatgatagccactgct
ctaaggaaggatttgagaatcaatgttccaactgctcccgagcttgggctgtttttggat
gagtgtctctatacttcatataaccagaaatggagcgattcacatgaggaattgtctctt
aaggattatgcagtgcaagctgaagagttcaaaatgaaacacatatattcccacatcgca
tctactgaacataaagaaggtcttgttgccctttggttgcactctctgaaccagaggaac
tatcccgattttcaaatggcagggatagacggaggtggaggctctgaaagcattgcagtt
ttaaaaggtgaagcagttggctaa
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