Amborella trichopoda: 18424283 Help Entry 18424283          CDS       T02990                                  Name (RefSeq) coatomer subunit alpha-1   KO K05236   coatomer subunit alpha Organism atr  Amborella trichopoda Brite KEGG Orthology (KO) [BR:atr00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:atr04131]     18424283   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:atr04147]     18424283 Membrane trafficking [BR:atr04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     18424283 Exosome [BR:atr04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    18424283   Exosomal proteins of bladder cancer cells    18424283 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 TPR_COPA_B EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP ANAPC4_WD40 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Fis1_TPR_C Beta-prop_WDR19_1st Aa-Ago_N Motif Other DBs NCBI-GeneID:  18424283 NCBI-ProteinID:  XP_006828935 UniProt:  W1NLI2 LinkDB All DBs Position Unknown AA seq 1216 aa AA seqDB search MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH KTQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHNEYPWIVSASDDQTIRIW NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR LTQMNTELFGGVDAVVKYVLEGHDRGVNWAAFHPSLPLIVSGADDRQVKLWRMNDTKAWE VDTLRGHTNNVSCVMFHARQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILAAHP EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLYYIKDRFLRCYEFSSQKDNQVIPIRRPG STSLNQSPRTLSYSPTENALLVCSDVEGGSYELYIVPKDSMGRGDTSQEAKRGVGGSAVF VARNRFAVLDKSNNQALVKNLKNEVVKKSILPIAADAIYYAGTGNLLCRAEDRVVIFDLQ QRTIIGDLQTPFIKYVVWSNDMESVALLSKHAIVIANKKLLHRCTLHETIRVKSGAWDDN GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTINCLDRDGKNRVIAIDATEYV FKLSLLRKRYDHVMSMIRNSQLCGQAVIAYLQQKGFPEVALHFVRDEKTRFNLALESGNI QIAVASAKEIDEKDHWYRLGVEALRQGNASIVEYAYQRTKNFERLSFLYLITGNMDKLSK MLRIAEIKNDVMGQFHNALYLGDIHERVKILENSGHLPLAYVTAAIHGLTEVTERLAVEL GDNVPSLPEGKKASLLIPPPPISCGGDWPLLRVMKGIFEGGLDNTGRGGDEEEEEAAVAD WGEDLDIVESSGQNGHVDAEVEGGGEQEEKSEEGGWDLEDLELPPEVESANASTNVRSTV FVAPTPGMPVSQIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKPFFLDLHMGS HSYLRAFASAPVVPIAVEKGWSESASPNVRAPPQLVYRFSMLDDKLRSAYKATTEGKFTE ALRLFLNILHIIPVVVVDSRRDADEVKELIVIAKEYVLGLRMEVRRREVRDDLKKQQELA AYFTHCNLQRIHLRLALMTAMGACFKGGNYITAANFARRILETDPPANQATKARQLLQAC ERNMKDANELNYDFRNPFVVCGATFVPIYRGQKDVACPYCMARFVPVLEGQLCPICDLAM VGSDASGLLCSPSQVR NT seq 3651 nt NT seq  +upstreamnt  +downstreamnt atgctgacgaaattcgaaacaaagagtaatagggttaagggtctgagctttcacagtaag cggccatggattctggctagtcttcacagtggcgtgattcagctatgggattatcgcatg ggtaccctcattgataggtttgatgagcacgatgggcctgttcgtggtgtgcatttccac aagactcagcctttgtttgtctcaggaggagatgattacaagatcaaagtttggaactat aagatgcacaggtgcctctttactcttcttgggcaccttgattatatccgaacagttcaa tttcacaatgagtacccttggattgtgagcgcaagtgatgaccaaactatcagaatatgg aactggcagtcacgcacatgcatctctgtgctaactggtcacaatcactatgttatgtgc gcctctttccatcctaaagaggatttggttgtatcggcttccctggatcagacagttcga gtatgggatataggtgccctgaggaagaaaactgtttctccagcagatgacatattaagg ctaactcaaatgaacacagagttatttgggggagtggatgccgtcgtgaaatatgtgttg gaaggccatgaccggggtgtcaactgggctgcgttccatcccagcctgccacttattgtt tctggagcggatgatcgacaagtgaaactgtggcgaatgaatgatacaaaggcctgggaa gtggacacattgagagggcacacaaataatgtgtcatgtgtgatgttccatgcacgacag gacatcatagtgtccaactctgaagacaaaagcatacgtgtctgggatgttacaaagcgc acaggggtacagactttccggagggaacatgatcgattctggattcttgctgctcatccc gaaatgaatctcttggcagctggtcatgatagtggcatgatagtctttaagctggagaga gaacgcccagcttttgcggttagtggtgattctctatattacattaaagaccgtttctta cgctgctatgagttctcgtcccaaaaagacaaccaggtgatacccataagaaggcctggc tccaccagtctgaaccaaagtccacgaactctttcatatagcccgactgaaaatgctctc ttggtctgctcagatgtggagggtggatcttatgaactctatattgtgcccaaggatagc atgggcaggggcgacacttcccaagaagcgaaaagaggtgtgggggggtctgctgtcttt gttgctcgcaacaggtttgctgtgcttgacaagagtaacaatcaagcgttggttaagaac ctcaaaaatgaagttgtaaaaaagagcattctccccattgctgccgatgctatatactat gctggcactggtaatttgctttgtcgtgctgaggatagggtggtcatctttgatcttcag cagcggacaattattggagacctccagactccatttatcaagtatgttgtttggtcaaat gacatggagagtgttgcattactcagtaagcatgcaattgttatagcaaataaaaagctc ttgcacaggtgcacactgcatgagaccattcgtgttaagagtggtgcatgggatgacaat ggtgttttcatatacacaactctgaatcatatcaagtactgcctccccaatggagacagt ggtataatccggacccttgatgttcccatatacatcacaaaggtttcggggaacaccatc aattgcttggatcgagacgggaagaaccgggtgatagccattgatgcaacagagtatgtt ttcaagctctctttgctgaggaagagatatgatcatgtgatgagtatgatcaggaactcg cagctctgtgggcaggctgtgattgcatatctgcaacagaaaggtttccctgaagttgcc ctccattttgttagggatgagaaaacccgcttcaatttagccttagagagtggaaacatt cagattgctgttgcgtcagccaaggagattgatgagaaagaccattggtataggttgggt gttgaggccctccgacaaggaaatgctagcattgtagaatacgcgtaccaaaggacaaag aactttgagaggctctccttcttatatctcatcactggaaacatggataagttgtcaaag atgttgaggatagcggagataaagaatgatgttatggggcagttccacaatgccctatat cttggtgacattcatgagcgagtcaagatcttggaaaactcgggtcatctcccacttgcc tatgttacagctgccattcatgggctaactgaagttaccgagaggcttgcagttgagttg ggagacaacgttccctctcttcctgaaggaaagaaagcttctttactcattccacctcca cccatctcttgtggtggggattggcccttgttaagagttatgaagggcatcttcgaaggt gggttggataacacaggaagaggaggggatgaagaggaagaagaagctgctgttgctgat tggggtgaagatttggatatcgtggaatcaagtggacaaaatggacatgtggacgcagag gttgaaggaggaggagaacaagaggaaaagagtgaggagggaggttgggatctcgaagac ttggagcttcctcctgaagtcgagagtgcaaatgcttcaaccaatgtgcgctcaactgtt ttcgtggccccaacaccaggtatgcctgttagccaaatctggacccaaaaatcttctctt gcaggtgagcatgcggcagctgggaactttgacactgcaatgcgattgctaagccgacaa ttgggtataaagaactttgctcctcttaagcctttcttcttggatttgcacatgggaagc cattcatatctcagggcgtttgcttctgcccctgtggtgcccatagctgttgagaaaggg tggagcgagtcagctagccccaatgtgcgggccccaccccaattggtttatcggttctcc atgttggatgataagcttaggagtgcatacaaggccaccactgaagggaagttcactgag gctttgaggctcttcctcaatattttgcacattatccctgtggttgtggttgattctaga agggatgctgatgaagtcaaggagctcattgtaatagcaaaggagtatgttttggggctt cggatggaggtgaggagacgtgaggtgagggatgatcttaaaaagcagcaagagttggca gcttactttactcattgcaatcttcaaagaatacatctcaggcttgcacttatgactgcc atgggtgcttgcttcaagggagggaactatattacagccgcaaattttgctaggcggatt ttggaaacagatccaccagccaatcaggcgaccaaggctcgccaacttttgcaggcttgt gagagaaacatgaaagatgctaatgaattgaattatgactttaggaacccttttgtggtt tgtggggctacttttgttcctatatatcgtgggcaaaaggatgttgcttgcccttattgt atggctaggtttgtacctgtccttgaaggccagctttgccccatctgtgaccttgcgatg gttgggtcagatgcctctggccttctctgctctccatctcaggtgagatga

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