Amborella trichopoda: 18424327
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Entry
18424327 CDS
T02990
Name
(RefSeq) 4-coumarate--CoA ligase-like 5 isoform X2
KO
K10526
OPC-8:0 CoA ligase 1 [EC:6.2.1.-]
Organism
atr
Amborella trichopoda
Pathway
atr00592
alpha-Linolenic acid metabolism
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
Module
atr_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
18424327
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
18424327
NCBI-ProteinID:
XP_011628972
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
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MTGVCIDRRCGFCKSNGVFYSKRKSIPLPSDEFLDAFTFISSQPHKGNIAFIEAATGRTL
AYIDLWRSVNSVAAGLSELGVRQGDVILLLSPNSIQFPIICLAVMSIGAIITTTNPLNTP
GEIHKQAADSNATLAFTIPALIPKLSLTNLPIVLIGSDTEPRSCITTLDRLMRTNPERRP
LVRIKQDDTATLLFSSGTTGVSKGVASSHRNVIAMVSVLQKRYSPGERLTFLCTVPMFHI
YGLCCFATGLLAAGTTTVVISKFELSEMLQAVETYRVTHLPIVPPILVALGGSEVSQRFN
LGSLKNVVCGGAPVSREVTEAFLRRFPGVVLTQGYGMTETAGIGASTETPEEGKRYGSAG
LLIPDMEAKIVDPETGESMPPNRRGELWLRGPSVMKGYFSNAEATAGTLNSEGWLRTGDL
CYFDEDGFLFVVDRLKELIKYKGYQVAPAELEALLLTHPNVEDAAVVPFPDKEAGQIPVA
FVVKKVAPYKKIRRVMFVRSIPKTSSGKILRKDLINLAIALSSNSKL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagtttgtattgaccggagatgcggcttctgcaaatcgaatggagtgttctac
agcaagaggaaatccatccccctcccttctgatgagttcttggatgccttcaccttcatt
tcgtcacagcctcacaagggcaacatagccttcatcgaagctgccaccggccgcaccctc
gcctacatcgacctctggcgatccgtgaattcagttgccgccggcctctctgagctcggt
gtccgacaaggtgatgttatcctcctgctctcaccaaactccatccaatttcccataata
tgcttggctgtcatgtccatcggtgctatcatcaccaccaccaaccccctcaacaccccc
ggcgaaatccacaaacaagctgccgactccaatgccaccctcgcttttacgatccctgcg
ctcatccccaaactcagcctcaccaacctcccaattgtactaatcggaagcgacactgag
cctcgctcctgcatcactacattagaccgtttgatgcggaccaacccagagaggcgacca
ttggtacgcatcaagcaggacgacacggccaccctgctcttctcttcgggcaccaccggt
gtgagcaagggtgtggcctcgtcccaccgcaatgtaatagccatggtctcggtgttgcaa
aagaggtactcaccaggggagcgtctcacctttctgtgcaccgtacccatgttccacatc
tacggcctctgctgctttgccaccggccttttagcagcaggcaccaccactgtggtcatc
tcaaaattcgaactaagtgagatgttacaggcggttgagacatacagagtgactcatttg
ccaatcgtgccccccatactcgtagctttgggtggaagcgaagtgtcacaaaggtttaat
ttgggatcactgaagaatgttgtgtgcggtggggcgccggtgagtagggaggtgacggag
gcatttctgagaaggttcccgggagtggtgctcacgcaggggtatgggatgaccgagact
gcaggcattggggcgtcgaccgagacaccggaggagggaaagcgatacggttctgctggg
ctattgattccagacatggaggccaagattgtggacccagaaaccggtgagtcgatgccg
cctaatcgtcgaggggagctatggctcagagggccttctgtcatgaaaggttatttcagt
aatgcagaggcgactgctgggaccttgaattccgagggatggctgagaacaggggattta
tgctactttgatgaggatggtttcctttttgtggtggataggttgaaggagctcatcaaa
tacaaaggttatcaggttgcacctgcagagctcgaggctctgcttcttacccatccaaat
gtagaagatgctgcagtcgtgccgtttcctgacaaagaagctggacaaattcctgtcgcc
tttgtggtcaaaaaggtggcgccatacaagaagatccgaagagtcatgttcgtgagaagc
atccctaagacatcttcggggaagatacttaggaaggatctcatcaacctcgccattgcc
ttatcttccaattccaagctctaa
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