Amborella trichopoda: 18424354
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Entry
18424354 CDS
T02990
Name
(RefSeq) neutral ceramidase isoform X2
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
atr
Amborella trichopoda
Pathway
atr00600
Sphingolipid metabolism
atr01100
Metabolic pathways
Module
atr_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
18424354
Enzymes [BR:
atr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
18424354
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
18424354
NCBI-ProteinID:
XP_006829006
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MVFISAKILQEKLCQLFLLVSLLSTLILICGASRATPKADLATGDYLVGVGSYDMTGPAA
DVNMMGYANMGQVASGIHFRLRARTLIVAQGFEGPRIAFVNLDAGMASQLVTIKVLERLK
TRYGNVYTQDNVAISGTHTHSAPGGYLQYLLYVLASMGFSPQCFDAMENAIEESIVQAHN
TLAPASLLINKGDVENAGINRSPSAYLFNPAQERAKYPQDVDPEMTLLKLVDQKTGAPLG
AFSWFATHGTSMTKENKLISGDNKGAAARFFEDWFTTHEGPSPTSPSPNPESNESIAAIK
ATGGEACNNETSRQYRVRKSQKFVGAFCQSNVGDVSPNVLGTICIDSGTPCDFNHSSCNG
NNLLCVGRGPGYPDEISSTKIIGERQFQKAVDLFTTAKDQISGKVDYRHVYVNFTNIAVE
LESQEVVNTCPAALGPGFAAGTTDGGGIEGFQQGDTKISEKWRRTRDSLHKPSQSQIDCH
KPKAILLDVGEMFEPYQWAPAILPIQILRIGQLVILAVPGELTTMAGRRIREAVKDTLVN
QGKGEFDENTHVLIAGLANTYSQYITTFEEYQQQRYEAASTLFGPHTLSAYIQEFNKLAA
SMAIGENIGNEGPSPPDLSSVELILVKPPTGDRKPSNVNFGDVKKDVGSDNVKRGQIVSA
TFWSGNPRNDLLTEGTFAAVEMLSSDQKTWVPAYDDDDFSLIFKWSLENTTDSGLATIQW
EIPQTAALGVYRLRHFGSAKSLTASSLEYFTGTSSSFKVS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggtttttatttctgccaaaattctccaagaaaaactatgtcaactcttcttgctcgtc
tctctgctctcaacactcatactgatatgtggtgcttcacgtgctacgccgaaggcagat
ctcgccactggagattacctggttggtgtcggtagttacgacatgacaggcccagctgct
gatgtgaacatgatggggtatgctaacatgggtcaggtcgcgtcggggattcactttcgc
cttagagctcgaacattgattgtggctcagggattcgagggccctaggattgcctttgtg
aacttggatgcaggcatggcctcccagttagtgactattaaagtccttgaaaggcttaag
actagatatggtaatgtatacacacaagataacgtggccattagcgggacccacacccac
tccgcgccaggtggctaccttcaatacctgctctacgtgctggcctcaatgggcttctct
ccccaatgcttcgatgcaatggagaacgccatagaggagagcatagttcaggctcacaat
accttagctccagcttctctgctcatcaacaaaggagatgtggagaatgcgggtataaac
aggagtcctagtgcatacttgttcaatcctgcacaagagagggccaaataccctcaagat
gtggaccctgagatgaccctcttaaagttggtggaccaaaaaacaggtgcaccacttggt
gctttctcatggtttgcgacccatgggacctccatgactaaggaaaacaaacttattagt
ggtgataacaaaggggcagctgctaggttctttgaggactggttcacaacacatgaaggg
ccttctccaacttctccctctccgaacccagaatcaaatgagtcaatagcagcaataaag
gcaacaggaggggaggcatgcaacaatgagacaagtagacaatatagagtgagaaaatca
cagaagtttgtgggagcattttgccaatcaaatgtgggagatgtgagccctaatgtatta
ggaacaatttgtattgactctggcacgccttgtgatttcaaccactcttcttgcaatgga
aacaatctgctttgcgttggaagagggccaggttacccagatgaaatatcgagcactaaa
atcataggagagaggcaattccaaaaagcagttgatcttttcactacagcaaaggaccaa
atatcaggaaaagtagattatcgccatgtctatgtcaattttacaaatattgctgtggaa
ttggagagtcaagaggtcgtgaatacatgcccagctgcattggggcctggctttgctgct
ggtaccacagatggcggtggaatagaaggatttcaacaaggagatacaaagatcagtgaa
aaatggaggaggacacgggattcattgcataaaccaagccaaagtcagattgattgccac
aagcccaaggccattctccttgatgttggagaaatgttcgaaccttatcaatgggcgcca
gcaattcttcccatccagatcttaaggataggtcaacttgtcatactggcagtgcccgga
gaacttacaacaatggcgggcaggagaataagagaagccgtcaaggatacgctggtaaac
caaggaaaaggagaattcgatgaaaatacccatgttctcattgcaggactcgcgaacacc
tattcgcaatatattaccacatttgaagaatatcaacaacaaagatatgaggctgcttcc
actctatttggccctcatacgttgtctgcatacatccaagaattcaacaagcttgccgca
tcaatggcaataggagaaaatataggaaatgaagggccatcacctccggatctatcttca
gtcgaactaatccttgtgaaaccaccaacaggtgacaggaaaccgtcaaatgttaacttt
ggtgatgtaaagaaagacgtcggttctgataacgttaagagaggccaaattgtgagcgca
accttttggagcggcaacccaagaaatgatcttttaacagaaggcacttttgccgctgtc
gaaatgctcagtagtgatcagaaaacatgggttccagcatatgatgatgatgatttttca
ttaattttcaagtggagtctggaaaatactactgactctggtttagccactattcaatgg
gaaatacctcaaacagctgctcttggagtttataggttgaggcattttgggtctgcaaag
agcctaacagcctcttctcttgaatatttcactggtacttccagttcttttaaggtctct
taa
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