Amborella trichopoda: 18424389
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Entry
18424389 CDS
T02990
Name
(RefSeq) RAB6A-GEF complex partner protein 1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18424389
Membrane trafficking [BR:
atr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
18424389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
18424389
NCBI-ProteinID:
XP_011629092
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MYMAYGWPQVMPIESGLCPTSLRIVYLKVLNRLLLVVSPSHLELWSSSQHKVRLGKYIRD
LNSVQSEGENLQAIWSPDAKMIAVLTTSFTLHIFRVQISEKQLMLGGNQPSGLSLATINL
VFSGRAPFFGKKLTVSNFVCDSRSICLGLSDGVLYVTSWKGEFSDTFKLHTHTVVAQDSH
QLLQNGFSTPDGISQVSASSFRSSSDSAIVQLELSLLLRLLVVICSDGQVALCSLSKKGL
KQPDSIKVEKWLSHCDAVCASIASEQQILAIGCRRGAVELYDLADSASLMRTVALYDWGY
SVEDTGSVNCLAWTPDNSAFAVGWKFRGLTVWSISGCRLMCTIRQIGISSASSPMVKANQ
DFKCEPMANGVAFAHWDEHGYKLYAVEQRTTDRILAFPFGKCCLNRGICGTTYVRQIIYG
EDKVLVVQSEDTDELKFLHLNLPVSYISQNWPVLHVVASKDGMYLAIAGSRGLILYDLRY
KKWRVFGDITQEQMIQCKGLLWLGKIVVVCNYNESSNSYELLFYPRYHLDQSSLLCRKSL
LGMPVVMDVCDDYVLVTYRPFDVHVFHAKLLGELSPSMNPVLQLSTVRELSIMTAKKHPA
AMRFIPDPLLKDSITNKNQSSPSDPLYRQPTRCLILRTNGELSLLDLDDGSERELTNSVE
LFWVTCGQSEEKANLIEEVSWLDYGHRGMQVWYPSPGVDPFQQEDFLQLDPELEFDREVY
PLGLLPNAGVVVGVSQRMSFSACSEFPCFEPTPQAQTILHCLLRHLLQRDKSGEALQLAR
LSAEKPHFSHCLEWLLFTVFDAEISRQNMSKNQSSGPQQSMGSSLLEKTCDLLQNFPEYL
DVVVSVARKTDGRHWANLFAAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQYS
ALRLLQATLDESLYELAGELVRFLLRSGRDYDLLSAESDRLSPRFLGSFLFRPSFRKQDL
RSNSFSNREQSAHIASVKNILENHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERRGSA
RLENFASGLELIGQKLQMDTLQSRLDAEFLLAHMCTVSFKEWIVVLATLLRRAEVLVDLF
QDDMLALGQLPHENKWFKKGGSNSVFAEYDDLLNILEEQLSHVPSLERNSDI
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtacatggcatatggctggcctcaggtcatgcctattgaatctggcctctgccccact
tctctacggatcgtctatctcaaggttctcaatcgcctccttcttgttgtctctccttct
cacctcgagttatggagttcgtctcagcataaagtgagattgggcaagtacatacgagat
ctgaactcagttcagagtgagggagagaatttgcaggcgatatggagtcctgatgccaaa
atgatcgctgttcttacaacctctttcactctccatatcttcagggtacagatttccgag
aaacaactaatgcttggggggaatcaaccttctggcctgtcccttgcaactataaatcta
gttttcagcgggagagctcccttttttggcaagaaattgacagtaagcaactttgtgtgt
gatagcagaagcatctgtcttggactttcagatggtgttctatatgtcacatcctggaaa
ggagagttttcagacacattcaaacttcatacccatactgttgttgctcaagactcacat
caattgctgcagaacggtttttccactcctgatgggatttcgcaggtttcagcatccagt
tttcgttcctccagtgactctgctattgttcaacttgagttgtcattgctattgaggtta
ttagttgtcatatgttctgatgggcaagttgcactatgttcattaagtaagaagggacta
aagcaaccagattccattaaggtcgaaaagtggttaagtcattgtgatgcagtttgtgct
tccattgcttcggaacagcaaatcctagcaataggttgcagaaggggagctgttgaacta
tatgacctggcagatagtgcatcactgatgcggacagttgccttgtatgattggggctat
tctgtggaggatactggttcagtgaattgtttagcctggactccagataattctgctttt
gctgttggatggaaattcagaggtcttacggtgtggtccatatctgggtgtcgattgatg
tgcactattcgtcagattgggatcagctctgcttcttctccgatggttaaagcaaaccaa
gattttaaatgcgagccgatggcaaatggagttgcatttgcacactgggatgagcatgga
tataaactttatgctgttgaacagaggacaacagataggatacttgcatttccctttggt
aaatgctgccttaatagaggcatctgtggcactacatatgttcgccaaattatttatggc
gaagacaaagtcctagttgtgcaatcagaggataccgatgaacttaaatttttgcatctt
aatcttccagtatcttatatttcccagaattggccagttttacatgtagtggctagcaaa
gatggaatgtacttggccattgcaggttcacggggcctgatcctgtatgatttgcgttac
aaaaaatggcgtgtattcggcgatattacgcaggagcaaatgattcaatgcaagggcttg
ctatggttggggaagattgttgtcgtttgcaactataatgagtcttctaattcgtatgag
ttgctcttttatccaaggtatcatcttgatcagagctctttgctttgtcgcaaatcattg
ctgggcatgcctgtcgttatggatgtttgtgatgactatgtacttgtcacatatcgtccc
tttgatgttcatgtttttcatgcaaagctcttgggcgagttatcaccttctatgaatcct
gttttacagctttctacagtccgagagctttccatcatgacagcaaagaaacatcctgct
gcaatgcgttttattcctgatcctctgttaaaagacagtataacaaacaagaaccagtca
tctccttcagatcccttgtacaggcaacccacaaggtgtttgattttgcgcacaaatggg
gaactttctttgctagatttggatgatggtagtgagcgtgagcttaccaattctgttgaa
cttttctgggttacttgcggacaatcagaggagaaagcaaatcttattgaagaagtttct
tggttggattatggtcaccgtggaatgcaggtctggtatccttctcctggagttgaccct
ttccaacaggaggattttttgcagttggatccagagttagaatttgatcgggaagtttac
cctctagggcttcttcctaatgctggagttgtcgttggtgtctcccaaagaatgtctttt
tcagcatgctcggaatttccttgctttgagcctactcctcaagctcagacaattttgcat
tgtttactgcgacatcttcttcagagggacaagagtggggaagctttgcaattggcacgt
ttatcagctgagaaacctcatttttctcattgtttggagtggcttctattcactgtcttt
gatgctgaaatatccaggcaaaatatgagcaagaatcagtcatcaggtccccaacagtcc
atgggttcctctcttttggagaaaacatgtgatttgttacagaacttcccagaatatctg
gatgtagttgtaagtgttgcaaggaagactgatgggagacactgggctaacctttttgct
gcagctggaagatctacagaactatttgaggaatgcttccaacgtcgttggtatcgcact
gcagcttgttatatacttgtaattgcaaagcttgaagggcctgctgtgagccaatacagt
gccttgcgcttattacaggcaacattggatgaatctttatatgaacttgctggagagctg
gttcgatttttgctgcgatctggaagagattatgatcttttatctgcagaatctgatagg
ctctcaccaagattcctaggttctttccttttccgccctagctttcggaaacaggacctg
agaagcaatagtttttctaatagggagcaaagtgcacacattgcttctgttaagaacatt
cttgagaaccatgcgagctacctgatgtctggaaaagaactctccaagcttgttgcattt
gtaaagggcacacaatttgatttggtggagtacctgcaaagggaacgccgtgggagtgct
cgtctggaaaattttgcttcaggactggagctcattggtcagaagcttcaaatggatact
ctacagagtcggttagatgctgagtttctgcttgcacatatgtgtacagtcagttttaaa
gaatggattgtggtacttgctactcttttacgacgggcagaggttttggtcgatcttttc
caagatgacatgcttgctcttggtcaacttccccatgaaaacaagtggtttaaaaaaggt
ggctcgaactccgtttttgctgagtacgatgatctgctgaatatcttggaagaacagctt
tctcatgttccaagtttggagaggaattcagatatctaa
DBGET
integrated database retrieval system
