Amborella trichopoda: 18424616
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Entry
18424616 CDS
T02990
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
atr
Amborella trichopoda
Pathway
atr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
18424616
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Motif
Pfam:
GH3
GH3_C
GH3_M
AIG2_2
Motif
Other DBs
NCBI-GeneID:
18424616
NCBI-ProteinID:
XP_006829263
UniProt:
W1NMZ9
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MDKGLDMPKAADFVGATAEKDMKALQFIEEMTCQAEQVQAQVLSEILTRNAHTEYLQRYS
LAGLTDRHTFKAKLPVITYEDLQPEIQRIANGDRSPILSAHPISEFLTSSGTSAGEKKLM
PTIQEELDRRQLLYSLLMPVMNKFVPGLEKGKGLYFLFVKRETKTPGGLPARPVLTSYYN
SEHFRLRPHDPYNNYTSPIEAILCPDSFQSMYAQMLCGLCSYKEVLRMGAVFASGLLRAI
RFLQLHWREFVQDVTTGTPGTAITEPKIREALSRVLKPNPELAKHIVTECASENWEGIIS
RVWPNTKYLDVIVTGAMAQYIPTLDYYSGGLPLTCTMYASSECYFGLNLNPMCAPSEVSY
TIMPNMAYFEFLPHDQPPTESERVDLVDMVDVKVGREYELVITTYAGLYRYKVGDILRVS
GFHNNAPQFHFVRRKNCLLSIDSDKTDEADLQKAVEAAGVVLRREHGARIAEYTSYADTK
TIPGHYVIFWELLGGGESMPGSEVMEKCCLEMEEKMNAVYRQNRAESRSVGPLEIRVVKS
GTFEELMDYAISRGASINQYKVPRCVSFAPILELLDSRVVASHFSPTAPTYAKAHR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggataagggtttggatatgcctaaggctgcagatttcgtgggtgcgactgcggagaag
gacatgaaggcgctgcagttcatagaggagatgacctgtcaggctgagcaggttcaggca
caggtcctgtccgagatactgacgaggaacgcccacaccgagtacctgcaacgctacagc
cttgctgggctcaccgatcgacacactttcaaggccaagctccccgtcatcacctacgag
gacctccagcctgagatccaacgcatcgctaatggcgaccgatcccccatcctctctgcc
cacccgatctccgaattcctcacaagctctgggacgtcggcaggagaaaagaagctgatg
cccacaatacaagaggagttggaccgaaggcagctcctgtacagccttcttatgcctgtc
atgaacaagttcgtgcctggcttggagaagggcaagggactctacttcctcttcgtcaag
agggagaccaagacaccaggaggcctcccggcgaggcctgtgctcaccagttactacaac
agtgagcacttccggttgcgcccacatgacccttataacaactacaccagccccattgaa
gccatcctctgccccgattcgttccagagcatgtatgcacagatgctctgcggcctctgc
tcctacaaggaggtcctcaggatgggcgctgtctttgcctctggcctcctccgtgccatc
cgcttcttgcagctccactggcgagaattcgttcaggacgttaccactggcactccgggc
acggccatcaccgagccgaagattcgcgaagctctgtccagggttctgaaacccaacccc
gaactcgcgaaacatatcgtgactgagtgcgcgagcgagaattgggagggcatcatctcc
agggtttggccgaacacaaagtaccttgatgtgatcgtcaccggagccatggctcagtat
attccgacgctcgactactatagcggcggcctccccctcacttgcaccatgtacgcctcc
tccgagtgctacttcggcttaaacctgaaccccatgtgcgctccctctgaggtctcatac
accattatgccaaacatggcctacttcgagtttttgccccacgaccagcctccgacagag
tccgagcgagtggacctggtcgacatggttgacgtgaaggtcgggagggagtacgagctc
gtgatcacgacctatgccgggctctacagatacaaagtgggcgacatcctccgcgtgagt
ggattccacaacaacgcccctcagttccattttgtgcgtcggaagaactgcctattaagc
atcgactcagacaagaccgacgaggctgacctccagaaggcggttgaggccgcgggcgtg
gtcctccggcgcgagcacggtgcccgcatcgcggagtacacgagctatgccgacaccaag
accatcccggggcactacgtgatattttgggagttgttggggggcggcgagtcgatgcca
ggaagtgaggtgatggagaaatgctgcttggagatggaagagaagatgaacgctgtgtac
aggcaaaacagggcggagagccgctcagtcggtccacttgagattagggttgtgaagagc
ggaacttttgaggagctgatggactacgctatatcaaggggtgcgtccattaaccagtac
aaggtgcccaggtgcgtgagcttcgcgcccatactcgagctcttggactcgcgcgtggtg
gcctcccacttcagccccaccgcacccacttacgccaaggcgcatcggtag
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