Amborella trichopoda: 18424681
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Entry
18424681 CDS
T02990
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
atr
Amborella trichopoda
Pathway
atr03030
DNA replication
atr03410
Base excision repair
atr03420
Nucleotide excision repair
atr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
18424681
03410 Base excision repair
18424681
03420 Nucleotide excision repair
18424681
03430 Mismatch repair
18424681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atr03032
]
18424681
03036 Chromosome and associated proteins [BR:
atr03036
]
18424681
03400 DNA repair and recombination proteins [BR:
atr03400
]
18424681
DNA replication proteins [BR:
atr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
18424681
DNA Replication Termination Factors
ELG1-RFC complex
18424681
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
18424681
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
18424681
Check point factors
HRAD17(Rad24)-RFC complex
18424681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
RuvB_N
AAA_22
Mg_chelatase
AAA_assoc_2
AAA_11
AAA_16
AAA_5
nSTAND3
AAA_30
AAA_24
AAA_14
ResIII
AAA_2
SLFN-g3_helicase
PhoH
AAA_28
DNAX_ATPase_lid
AAA_19
AAA_7
AAA_25
RNA_helicase
DUF3853
AAA_18
IstB_IS21
Parvo_NS1
T2SSE
bpMoxR
TIP49
NPHP3_N
Cdc6_lid
NB-ARC
Motif
Other DBs
NCBI-GeneID:
18424681
NCBI-ProteinID:
XP_006829310
LinkDB
All DBs
Position
Unknown
AA seq
340 aa
AA seq
DB search
MAPVMQSSHPWVEKYRPKQVKDVAHQDEVVRVLSNTLQTANLPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKGFAAVAVGSGNPNSGYPCPPYKIII
LDEADSMTEDAQNALRRTLETYSKVTRFCFICNYVSRIIEPLASRCAKFRFKPLSEEIMS
SRISHICRQESLNLDSEALATLSSISDGDLRRAITYLQSAARLFGSSISAKNLISVSGVI
PQDVVESFLSACRSGSFEKANKEVENITAEGYPVSQLLSQLFDMVVGTTDISDEQKARIF
NRIAEADKYLIDGADEYLQLLDVASNTMRAICNMPQEFST
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgttatgcaaagctcccacccatgggtggagaaatacaggccgaagcaggtg
aaggatgtggctcaccaggatgaagtcgtccgtgtcctctccaacaccctccaaaccgct
aacctccctcacatgctcttttatggtccccctggaacagggaagaccaccacggccctt
gccattgctcaccagcttttcgggcctgaattgtacaagtccagggttttagagctcaat
gcaagtgatgaccgtgggatcaatgtggtgcgcacaaagatcaaaggttttgcagcagtt
gctgttggatcaggaaaccctaatagtggatacccatgtccaccgtacaagattattatc
ttggatgaggctgattcaatgactgaagatgcacagaatgcgctgaggcgaacattggaa
acttactccaaagttacaaggttttgtttcatttgcaactatgttagcaggatcatagaa
ccacttgcctcaagatgtgcaaagtttaggtttaagccactttctgaagaaatcatgagc
agtaggatatctcacatttgccgccaggagagtcttaatctggattcagaggctcttgca
actttaagctctatctctgatggggatcttcgtcgagcgataacatacttgcagagtgca
gctcgcttgtttggatcatctatatctgccaagaatctaatcagtgtttcaggggtcatt
ccacaggatgtggttgaatccttcctttcagcatgcaggagtggtagttttgagaaggca
aacaaggaagtcgaaaacataactgctgaaggatatcctgtatctcagttgctttctcag
ttatttgatatggttgttggtacgactgatatatccgatgaacagaaggccaggatattc
aacagaatcgctgaggctgataagtatctaattgatggggcggatgagtacctgcaatta
ctggatgtcgcgagcaacacaatgcgggctatctgcaacatgcctcaggagttttctacc
taa
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integrated database retrieval system
