Amborella trichopoda: 18425028
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Entry
18425028 CDS
T02990
Name
(RefSeq) protein argonaute PNH1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18425028
03036 Chromosome and associated proteins [BR:
atr03036
]
18425028
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
18425028
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
18425028
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
18425028
microRNA pathway
RISC loading complex
18425028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoMid
ArgoL2
Motif
Other DBs
NCBI-GeneID:
18425028
NCBI-ProteinID:
XP_006829662
UniProt:
W1NN88
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MPHRQMKESTEQHFISKKPLHNSMNQQTTIQEVANCKTQETQLEKTQNSVPQVNSRGKRR
ARGRVKALKGDSFMHTETGVDGNKQSSLSIMVPRKESQNGFYQNSTNSQASGRALSFPRR
PGYGQMGVKCIVKANHFLAELPDKDLNHYDVTITPEVSSKSVNKAIIAQLVKLYRESDLG
MRFPAYDGKKSLYTAGLLPFTSKEFNIKLDDEDDGMGGVRKGKEFKVAIKFVARADLHHL
REFLSGRRSDTPQEALKVLDVVLRELSSQRYYPVGRSFYSPNLRRPQRLGDGLESWCGFY
QSIRPTQMGLSLNIDMSSTAFIEPLPVVDFVAQLLKKDVLSRPLSDADRIKIKKALRGVK
VEVTHRGSVRRKYRVSGLTTQPTRELRFPVDDQSNMKSVIEYFQEMYGFTIKHTHLPCLQ
VGNQKKANYLPMEACKIVEGQRYTKRLNERQITALLKVTCQRPKDQETDILQTVHHNAYD
QDPYAKEFGLDISDKLASVEARVLPAPWLKYHDTGKEKNCLPQVGQWNMMNKKMINGSTV
NHWACINFSRGVQESTARGFCQELAQMCQISGMEFNPEPVIPVYSARPEQVEKALKHVYN
AAMNKLKGQELELLVAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKISKQYLANV
SLKINVKMGGRNTVLLDAVSWRIPLVSDIPTIIFGADVTHPETGEDSSPSIAAVVASQDW
PEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVAGGMIRELLISFRKATGQKPMRIIF
YRDGVSEGQFYQVLLYELDAIRKACESLEPNYQPPVTFVVVQKRHHTRLFANNHKDRSST
DRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGMQSLTN
NLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEVSDARSTRPVEGSAVRPLPALKEK
VKRVMFYC
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatagacaaatgaaggagagcacagagcaacattttatatccaaaaaacctctt
cataactccatgaatcaacaaacaacaattcaagaggtagccaactgtaaaacccaagaa
acgcaactggagaaaacccaaaactccgttcctcaagtgaacagtagagggaaaagaagg
gcaagagggagagtgaaagctttgaaaggggattcattcatgcacacagaaactggtgtt
gatgggaataagcaatcttctttgtcaattatggttccaaggaaggaatcacagaatggg
ttttatcaaaatagcaccaacagtcaggcttctgggcgagctttgagttttcctcggcgt
cctggctatggtcaaatgggtgtgaaatgtatagtaaaggctaaccatttccttgctgag
ttaccagataaggacttgaaccattatgatgtgaccatcactcctgaagtgagctccaaa
tctgtgaacaaagccatcatagcacagttggtgaaactttacagggagtcagatttgggc
atgagatttcctgcttatgatggaaaaaaaagcttatacacagctgggttgcttcctttc
acttcaaaggagtttaacataaagttagatgatgaagatgatggaatgggtggtgttagg
aaaggaaaagagttcaaagtggctattaaatttgttgctcgagccgacttgcaccatcta
cgtgaatttctatctggtaggcgatccgatactcctcaggaagctcttaaagttcttgat
gttgtcttaagggaactatcaagtcaaaggtattatccagtagggaggtcgttctattct
cctaatctgcgaaggccacagaggcttggagatggattggaatcgtggtgtggcttttac
cagagcattaggcctacccagatgggcttgtcacttaatattgacatgtcttctacggct
ttcattgaaccactccctgtggtggattttgtcgctcaacttttgaagaaggatgtcttg
tcgaggccgttgtctgacgccgaccgcataaagatcaagaaggcgctcagaggtgtaaaa
gttgaagttacacatagaggaagtgtgcgccgaaaatacagagtttcgggattgacaaca
caacctacgagagagctaaggtttccagtcgatgatcagtcaaacatgaaatcagtgatt
gaatacttccaagaaatgtatggatttacaattaagcatactcatctcccttgccttcag
gttggaaaccagaaaaaagcaaattatttaccgatggaggcatgcaaaattgtagaggga
cagagatacacgaagaggttgaatgagaggcagattactgccctgttgaaggttacttgc
cagagacctaaagatcaagaaaccgacattttgcagacagttcatcacaatgcatatgat
caagatccctatgcgaaggaatttggcctcgatatcagtgacaaacttgcttcagttgaa
gcgcgagtgcttcctgcaccttggcttaaataccatgacactggtaaggaaaagaactgt
ctaccacaagttgggcaatggaatatgatgaacaagaaaatgataaatggcagcacggtg
aatcactgggcctgtatcaatttttcccgaggggttcaagaaagcaccgctcgtggcttt
tgccaagaactagcacagatgtgtcaaatatctggcatggaattcaatcctgaaccggtg
attcctgtctattctgccagacctgaacaagttgaaaaggctttaaagcatgtctataat
gcggccatgaataaacttaagggccaagagttagagttgcttgtagccattcttcctgac
aacaatggttcattgtatggggatcttaaacggatctgcgagactgatctgggtttaata
tctcaatgctgtttaacaaagcatgtattcaagataagcaaacagtacctagctaatgtt
tcgttaaagatcaatgttaagatgggtggaagaaatacagttcttttggatgctgtaagt
tggagaatccctttggtcagtgatataccgactattatctttggggcagatgtaactcac
ccagagactggagaagactccagcccttcaattgcagctgttgtagcttcccaggactgg
ccagaagttacgaaatatgcaggcctggtttgtgctcaggctcatagacaggagcttata
caagatttgtacaagacatggcatgacccagtgaggggaacagtagctggaggcatgatc
agggaactcttaatttcatttaggaaggccacaggacaaaagccaatgaggataatattc
tacagggatggtgtgagtgaagggcaattttatcaagtattgctatatgagttggatgcc
attcgaaaggcctgtgaatccttggagccaaattatcagcctccggtgacatttgtggtg
gtccaaaagcgacaccatactagactctttgccaacaaccataaggacagaagcagcact
gacagaagtggcaacattttacctggcactgtagtggactcaaaaatatgtcatcctacc
gagtttgatttctatttatgcagtcatgctggaattcagggaacaagtcggccggctcat
taccatgtgctgtgggacgagaacaatttcactgctgatggaatgcagtctttaacgaac
aatctttgttatacgtatgcgcgatgcactagatcagtttcagtggttcctcctgcatac
tatgcacacttggctgcatttcgagcaaggttttacatggagcctgaggtctcggacgct
cgaagcacgagaccagttgaaggatcggctgttcgtcctcttccagcattgaaagagaaa
gtgaagagggtcatgttctactgctga
DBGET
integrated database retrieval system
