Amborella trichopoda: 18425098
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Entry
18425098 CDS
T02990
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 53
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atr03009
]
18425098
03036 Chromosome and associated proteins [BR:
atr03036
]
18425098
Enzymes [BR:
atr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
18425098
Ribosome biogenesis [BR:
atr03009
]
Eukaryotic type
Pre-60S particles
Helicases
18425098
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
18425098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
18425098
NCBI-ProteinID:
XP_006829732
UniProt:
W1NNB9
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MAAAFSVTGAIFSAHPTTPFLQKRHTQGQVHLLPWPLRKTMSFSLIPTFSVARSRGICLN
VRAASAATVECDVREKEGLDIAKLGISEEIVSSLSRRGITELFPIQRAVLVPAMDGRDMI
GRAITGSGKTLAFGIPILDKIIRHNTHRRQKRVPSALVLAPTRELARQVQKEFKESAPNL
ISACLYGGIPIMNQVRVLSFGTDIVVGTPGRIIDLIERGALDLSEVKFVVLDEADEMLAV
GFQEAVECIMNYLPSKKQCMLFSATMPSWVNELAKKYLRDPLVIDLVGDSEQKLAEGISL
YSVASTTYRKQSVLQSLITKFAQGGKSIVFTRTKKDAEVLSRTMGSTLGSRALHGNMQQF
QRDRTLAAFRDGHFNVLVATDVAARGLDIPNVDLVIHFEIPNTSEIFVHRSGRTGRAGKK
GTAVLIYTEDQRRTVRLIERDVGCKFEELPKIKDVGSIPDNFEESPRGGFVDRVRSRFDR
PSNSGVTHFDSYRSSQGSRYDTADETRGRGSRDFDSSRRGQFGGYESYERTPFSSNRGRS
HCQPANQRTQFGGSSNFGSKRFTERGKHYSEREGASGSGWASRSFAQANERETSLSDMAF
NDAFGHRRQQRRPTFGNDRSDDIEMFDVFGDRSKSKRRQGLRGKSSIDSDLEDW
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgctttttcagttacaggggccatcttctctgctcaccccaccacccctttt
ctccaaaagaggcacacacagggccaagttcaccttcttccatggccactccgcaaaacc
atgagcttttctcttatccccaccttttcggttgctcgcagtcgtggcatttgcctaaac
gtgagggctgcttcagctgctactgtggagtgtgatgttagagaaaaagagggtttggac
attgctaagcttggtatctcggaagagattgtctcctcgttgtctcgaaggggaattaca
gagctctttcctatacagagagcggtgctggtgccggcaatggatggtcgtgatatgatt
gggcgggctataacgggatctggaaagactctggcctttggaattcctatattggacaaa
attattcgacataatactcatcgcaggcaaaaaagagttccctctgctctggtattggcc
cctactcgggagctagcacggcaggttcagaaagagttcaaggaatctgccccaaatttg
atcagcgcttgtctttatgggggtattccaattatgaaccaagttcgggttcttagcttt
ggtactgatattgttgttggcacgcccggtcgtattatagatctgattgaacggggtgcc
ttagacttatcggaagtcaagtttgttgtgttagatgaagctgatgagatgcttgctgtt
ggtttccaagaggctgttgagtgcatcatgaattatttgccttcgaagaagcaatgcatg
ctgttttctgccactatgccttcatgggttaatgaactcgcaaagaagtacttgcgggat
ccattagtcatcgaccttgtgggtgattctgagcaaaagttggctgaaggtatctctctt
tattcggttgcttcaactacttacaggaagcagagtgttctccagtctttgatcactaaa
tttgcacagggagggaagtccatagtttttacgaggaccaagaaagatgctgaagttctt
tcgagaaccatgggttctactctaggaagcagggctttgcatgggaacatgcagcagttt
caaagggacagaaccctagctgcttttcgagatggccactttaatgtgctggtagctaca
gatgttgctgctcgtgggcttgacattccaaatgtcgatctggtaattcattttgagata
ccaaatacatcagagatttttgtccatagatctgggcgaactggacgtgctggaaagaaa
ggcactgcagtgcttatttatactgaagatcaacgccgcacagtcaggctaattgaacgt
gatgttggctgcaagtttgaagagttgccaaaaatcaaagatgttgggagtatacctgat
aactttgaagagagcccacgtggagggtttgttgatagggtaagaagccgctttgatcgt
ccttccaattctggtgtaactcattttgacagttatagaagctcgcaaggaagtcgttac
gatactgccgatgaaaccagaggccgtggttctagagactttgacagctcaagaaggggc
caatttggaggatacgaaagctatgaaaggaccccattttcaagtaatagagggagatca
cattgtcagcctgcgaatcaaagaacccaatttggtggctcctctaattttgggagcaaa
cgttttactgagagaggaaagcattatagtgagagagaaggtgcatctggatcgggatgg
gcctcaagatcttttgcgcaagcgaatgagagagaaacatccttatctgatatggctttt
aatgatgcctttggccatcgaaggcagcagagaagacccacatttgggaatgacagatca
gatgatatagagatgtttgatgtatttggggatcgttccaaatcaaaaagaaggcaaggg
ctccggggcaaaagctcaattgattctgacttggaagactggtag
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