Amborella trichopoda: 18425100
Help
Entry
18425100 CDS
T02990
Name
(RefSeq) protein CHROMATIN REMODELING 25 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
atr
Amborella trichopoda
Pathway
atr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
18425100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atr03400
]
18425100
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
18425100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
18425100
NCBI-ProteinID:
XP_006829734
UniProt:
W1NPV8
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MVKTGEEESRVKCIHCKSESLRFSPEANDGHGAYICPTAGNFEPGHGCARLVSIEEFGAL
DAEDDTASASASGEDGDEDGDCDEDYAEDDEVLSSESTMSDEDRKMQNIDALLRGNLIVR
RQSLLPSLSISDGAATARKPFKPPSKNGYRDQNEDLFRRLWARKRFVPWGSSRPALVAIS
SFLKIPNEVNQDTVEEIQSLPPGIEPLVLWQPGESEMDRDNLTPIVVDPLLVRFLRPHQR
EGVQFMFECVLGLSKAAGISGCILADDMGLGKTLQSITLLYTLLRQGFDGKAIAKRAMIV
TPTSLVSNWESEIVKWLEGRVPLIALCETARADVVSGIDSFLSPHSPSQVLIISYETFRM
HSSKFCKTGCCDLLICDEAHRLKNENTLTNRALASLPCSRRILLSGTPMQNDLEEFFSMV
NFTNPGILGDATTFRRYYEAPIVCGREPNATDEERKLGFERSSELSAKVNQFILRRTNTL
LSNHLPPKMVEVVCCKLTPLQTDLYRHFIQSKNVKQAIAEEMRQSKILAYITALKKLCNH
PKLIYDTIRSGNSGTSGFENCLQFFPSELFSSRSGSWTGGDGIWVELSGKMHVLARLLAH
LRKLTDDRIVLVSNYTQTLDLFAQLCRERKYPFLRLDGTTSVSKRQKLVNKFNDSSQDEF
VFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLTTGTI
EEKVYQRQMSKEGLQKVIQQDQNDNVKAEVNFLSMEDLRDLFTLHDDVRSEIHERMNCNR
CQDNTLELDNCHGKIEEVDNNLDSLDDVHPDHQQGSDIGCFAEIAGCLHKLRSWEKQLGS
PNEEDLLSWGHHCLPTTVPDPILQASAGEEVTFVFTNQVNGKLVPVESTPRDRQTKGVGT
GERTHVPTERLHHQRPILQRPNLPSTLPKNFLRSSDGSLKCASICSGTRPISDICKARLL
RVTGVSPRNLLPIKRMATDSDKQDDDFT
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaactggcgaagaggagtcgcgcgtcaaatgcattcactgcaagtccgagagc
ctaaggttttctcccgaggccaatgatggccatggtgcgtacatttgccctaccgcaggc
aactttgaacctggccatggctgtgctagacttgtttcgattgaggaatttggtgctctg
gatgccgaggacgatacggcctctgcgtctgcttccggagaagatggcgatgaagatgga
gattgtgatgaagactatgcggaagatgatgaagtactatcttctgagtctaccatgtct
gacgaggataggaagatgcagaatattgatgcccttttgaggggaaaccttattgtgagg
agacagtctctacttcccagtctttcgatatcagatggtgcagccacagctagaaaacca
tttaaacctccctctaaaaatggttatagagatcaaaatgaagatctttttcgtcgcctt
tgggctaggaagaggtttgttccttggggttcttctagaccagctttggttgcaattagt
agctttcttaagatcccaaatgaagttaaccaagacacggtggaggagattcagtctctt
ccacctgggattgagcctttggtattgtggcaacctggagaatcagaaatggatcgagat
aatttgacaccaatagttgtagatccattacttgttcgttttcttcgacctcatcagaga
gaaggtgtacagtttatgttcgagtgtgttttgggtctatcgaaagcagctggtatttct
ggatgtatcctagctgacgatatgggtttagggaagaccttacaatcaatcaccttgcta
tatactcttcttcgtcagggatttgatggaaaggcaatcgccaagagggcaatgatagtg
acccctacaagcctcgtgagcaattgggaatctgaaattgtgaaatggcttgaaggaagg
gtaccacttattgctctatgtgaaactgctagagctgatgttgtttcagggattgacagt
ttcctttcccctcatagcccttctcaggtgctgattatttcatatgagacatttcgtatg
cattcatcaaaattttgcaagactggttgttgtgatcttctcatatgtgacgaggctcat
cggctcaaaaatgagaataccttgacaaaccgcgcattggcttctctaccatgtagcagg
cgcattttgttatcaggaacacctatgcagaatgatcttgaggagttcttttccatggtt
aactttactaatcctgggattcttggagatgcaactacttttcgtcgttactatgaggca
ccaattgtttgtggaagagagccaaatgcaactgatgaagagagaaagttagggtttgag
cgatcaagtgagttaagtgcaaaagtaaatcagttcattctcaggaggacaaatactttg
ttatcaaatcacctaccccctaagatggtggaagttgtctgttgcaagttgacacctctt
caaactgatttgtatcgccatttcatacaatcaaaaaatgtcaagcaagcaattgcagaa
gagatgaggcaatccaaaattttggcctacattacggcgcttaaaaagttatgcaatcac
ccaaagttgatctatgatactatcaggagtgggaattcggggacatcaggttttgagaat
tgcctccagtttttcccatcagaattgttttcctctagatctggttcatggactggtggt
gatgggatatgggtagaattgtctggaaaaatgcatgtcttggcaagattacttgctcat
ctgaggaagttaacggatgatcgaattgttctggtttcaaattatactcagactcttgac
ctttttgctcaattatgtcgggaaagaaagtaccctttcttgaggttggatggaaccact
tctgttagtaaacggcagaagttggtgaacaaattcaatgattcctctcaggatgagttt
gtatttcttttgagcagcaaggctgggggttgtggtctgaatctaattgggggaaatcgg
ctggtcttatttgatcctgattggaaccctgcaaatgacaagcaggcagctgctagagtt
tggagggatggccagaagaagagagtattcatttacaggtttttaaccactgggacaatt
gaagaaaaggtatatcagcgtcagatgtcaaaagaagggcttcagaaagtgattcaacaa
gatcagaatgacaatgtgaaagcagaggtgaacttcctttcaatggaagatttgcgggat
cttttcacattgcatgatgatgtaaggtctgaaattcatgaaagaatgaactgtaatcga
tgtcaagacaatactctggagttagataactgccatggaaaaatagaagaggttgataat
aaccttgactcgttggatgatgtgcatccagatcatcaacaaggttccgatataggttgt
tttgctgaaatagctggatgcttgcacaagttgaggagctgggagaaacagctgggttct
cccaatgaagaggacttgttaagttggggacatcattgtctgccaaccacggtacctgat
ccaattcttcaagcttctgccggtgaagaggtgacatttgttttcactaaccaggttaat
ggaaaacttgtacctgtcgagtctactccacgagatagacagaccaaaggagttggaaca
ggtgagagaacacatgttccaaccgagagactacatcaccaaaggcctatattgcaacga
ccaaatttgccctctacgttgccaaaaaatttccttagatcaagtgatggctcactaaag
tgtgcatctatttgtagtggaacacgtccgatcagtgatatttgtaaagcacgattacta
agagtgactggtgtttctcccagaaatttgttgcccatcaaaaggatggctactgatagc
gataagcaagatgatgattttacctag
DBGET
integrated database retrieval system
