Amborella trichopoda: 18425241
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Entry
18425241 CDS
T02990
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atr03032
]
18425241
03400 DNA repair and recombination proteins [BR:
atr03400
]
18425241
Enzymes [BR:
atr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
18425241
DNA replication proteins [BR:
atr03032
]
Prokaryotic type
DNA Topoisomerases
18425241
DNA repair and recombination proteins [BR:
atr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
18425241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-GeneID:
18425241
NCBI-ProteinID:
XP_006829870
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MLQWQATQACRKTTSFPSLMAFSSSLRLATKTLVRFHHSSLQLHGSFTCFPHLQTPNYRF
FSVKKEVRLLSGVSRGPGKGSGVVRAKRRDGGDEGKGEKKALENDDAEGGNGGVMVKEKA
FEARVVMAELHKEATESYLAYALSVLVGRALPDVRDGLKPVHRRIIFAMHELGFSSRKPF
KKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSMRCPLIQGHGNFGSIDADPPAAMRYT
ECRLEALTEAMFLSDLEQNTVNFVPNFDGSQKEPSLLPARVPNLLLNGSSGIAVGMATNI
PPHNLGELVDALSVLLHNPDATLQELLEYMPGPDFPTGGEIMGNIGILDAYRTGRGRIVV
RGKTDVEVLDAKGKLSALVIREIPYQTNKASLVEKIAELVEDKSIEGVSDIRDESDRSGM
RIVIELKKGSDPSIVLNKLYKLTVLQSSFSCNMVGILDGQPKLMGLKEMLQAFLDFRCSV
IERRARFKLKQAQEREHIIEGILVGLDNLDDVIHLIRENSSLSMASAALKKAYNLSDKQA
EALLDITLRKLTSLERKKFVEEGESLKEQISKLNELLSSKKLVYQMIEQEAIEVKNKFRT
PRRSSLEEGDGSQLEEIDVIPNEEMLLVFSEKGYVKRMRPNTFSLQNRGTIGKSVGKMRV
NDALSDFIVCHAHDHVLYFSDKGIVYSARAFRIPECTRTAAGTPLVQILSLSDGERITSV
IPVSEFVKDQYLIMLTAKGFIKKISLEFFSAIRITGIIAIQLVPGDELKWVRLCSNDDLI
AMASQSGMVLLSSCETLRAIGRTARGVVSMRLKDGDRMASMDIIPAAMQKNLQKEGKDLS
APWLLFVTESGYGKRVPVSSFRMTRFRRKGVIGYKLPPNDGLAAVFAVGFSLSADGESDE
QVVLVSQSGTVNRIKVRDISIQSRSAMGVILMRLEFAGKIMSASLMSATEADDSSESEEQ
SVA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaatggcaggccactcaagcctgtagaaagaccacttctttcccctctttgatg
gccttctcctcttcccttcgcctcgcaaccaaaaccctagttcggttccaccattcttct
ctgcaactccatggctccttcacctgtttcccgcacctccaaacccctaattacaggttt
ttctctgtcaaaaaggaggtcaggcttttatctggtgtttcgagggggcctggtaaaggc
tctggtgtagtcagggcaaaacgtagagatggcggagatgaaggaaagggagaaaagaaa
gccctggaaaatgatgatgcagagggtggaaatggaggggttatggttaaggagaaggct
tttgaggccagggttgtgatggctgagcttcacaaggaggccaccgagtcttacttagct
tatgccttgtctgtgcttgttggtcgtgctttgcctgatgttcgcgatggattgaagccg
gtgcatcgtcgaattatatttgcaatgcatgaattgggtttttcatcgcgaaaaccgttc
aagaaatgtgctagagttgttggtgaggtgttgggaaaattccacccacatggagatact
gctgtctatgactcattggtccggatggcccaggacttctcaatgcgttgcccacttatt
caagggcatgggaactttgggtctattgatgctgatccacctgctgcaatgagatataca
gaatgcagactggaagcactcacagaagctatgtttctgtcagatctcgaacaaaacacg
gttaatttcgttcctaactttgatgggtctcagaaagagccttcgcttctgccagctcga
gttcctaaccttctgttgaatggttcttctgggattgcggttggaatggcaaccaatatc
cctcctcacaatcttggtgaactggtagatgcactctctgtattgcttcataatcctgat
gctacactccaagaattattggaatacatgcctggacctgactttccaactggtggtgaa
attatgggaaatattgggattttagatgcttatcgaactggtcgtgggcgtatagttgtc
agaggaaagaccgatgtggaggtgcttgatgcaaaaggcaagctctccgctcttgtaatt
agagagataccttatcaaaccaacaaggcttccttagtggagaaaattgctgagcttgtg
gaagacaagagcatagagggtgtaagtgatattcgtgatgagagtgatcgatctggaatg
cggatagtgattgagttaaagaaggggtctgatccatccattgttctcaacaagctgtac
aaactaactgtacttcagtcgagctttagctgcaacatggtgggtatacttgatgggcaa
cccaaattgatgggtttgaaagagatgcttcaggccttcttagattttagatgctcagtt
attgaaaggcgggcaagattcaagctcaaacaagctcaagaacgagaacatatcattgag
ggtattttagtggggctcgataatttagatgatgtcattcatctaattagggaaaattca
agtctttcaatggcctcggctgctttgaagaaagcatataacctctcggataaacaagct
gaggctttattggacataaccttgagaaaacttacttctcttgagaggaaaaagtttgtg
gaagaaggtgagtctttgaaggaacagatttctaagctgaatgaactcttgtcaagcaaa
aaacttgtatatcagatgatagaacaagaagctattgaagtaaagaacaaattcagaacg
ccaagacgttcatcactggaagaaggagatggcagtcaactggaagaaattgatgttatt
cctaatgaagaaatgcttctggttttcagtgagaaaggctatgttaaacggatgaggccc
aacacttttagtttacagaaccgtggaacaattggaaaatctgttgggaaaatgcgtgta
aatgatgccttgtctgacttcattgtctgccatgcccatgatcatgttctttatttcagt
gataagggaattgtgtactctgcccgtgcttttcgaataccggagtgtaccaggactgct
gcaggtacacccctggtccagatattatcattatctgatggtgagagaataacatctgtt
attccggtcagtgaatttgtgaaggaccaatatctaataatgctaactgcaaaagggttc
atcaagaagatttctctggagttcttctctgcgataagaataactgggattatagcgatt
cagctggttcctggtgatgagctgaaatgggtccgtctctgctcaaatgatgacctcatt
gcaatggcttctcagagtggaatggttcttttaagctcttgcgaaactcttcgagcaata
ggaagaactgctaggggagtggtttccatgagactgaaggatggagaccgaatggcatct
atggacataattccagcagccatgcagaaaaacctacagaaagagggtaaagatctgagt
gctccatggctgctttttgtgactgagagtggatatggcaagcgtgtgcctgtgagcagc
tttcggatgacgaggtttaggaggaagggtgtgataggctacaagcttcctcccaatgat
ggtctggctgctgtatttgctgttggattttcgttgtcagctgatggtgaaagtgatgaa
caagtagttttggttagccaaagtggaactgtcaacagaatcaaggttcgtgatatttcc
atacagtcacgcagcgcgatgggagttattctcatgagattggagtttgccggaaagata
atgtcggcatccctaatgtctgctacagaggcggatgatagttctgaatctgaagaacaa
tctgtggcatag
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