Amborella trichopoda: 18425397
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Entry
18425397 CDS
T02990
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 4
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
atr
Amborella trichopoda
Pathway
atr00270
Cysteine and methionine metabolism
atr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
18425397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atr03000
]
18425397
03032 DNA replication proteins [BR:
atr03032
]
18425397
03036 Chromosome and associated proteins [BR:
atr03036
]
18425397
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
atr02048
]
18425397
Enzymes [BR:
atr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
18425397
Transcription factors [BR:
atr03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
18425397
DNA replication proteins [BR:
atr03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
18425397
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
18425397
Prokaryotic defense system [BR:
atr02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
18425397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNMT1-RFD
BAH
Motif
Other DBs
NCBI-GeneID:
18425397
NCBI-ProteinID:
XP_020517664
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MEDSFVSPKNKRKRSVSPQGRKRRLSWTDSEIISGPIAPSSTSMEESEPTITSCSGSQEN
LETIPGLLSGLEGKEGHVHGFCSASEEKPQAMKASGKRAASTDLPYGSSKRVKPISVDPL
NFKETDASLSGAAMSLLTSGATKTSSTGQGNEPKSLVERNVGSSSASKPSKDSDSNENPD
LTIQEEQRSQEKLEGEDQELEGEEEVGEGKGVVIPFEGCTSENLRFRCGPFGPVRSWCIT
GFRGMFLSIWVSTGLADYLCVMPRESYFHYYSCFKFKASLCFRTFQELTLDKEVEFGDLL
SLLALNMLDDCPGYADFNLMSDAAKPHMAFVADQLVALDEHFSEFKVIKMINEEFKEDME
KIRILRQANMVSGRKFSGSFYSIQNCNEEFTKASSKDNDGEKARRGATSSQTSLEEEKHH
PPKKQSLPTIIESQEKNIETIKKTALDVRKKTEEIEVVNDEYVAVSITGTTNSKTTKDQR
RLKGFEMLDKGEVMQPFENLEADRMYITSEIWTSYNSEEPDLGVRCKSFGPALSWCITGY
EKEAPEIWVSTEMADYLCQKPSADYMPFFKPFYEKAMLCIQAFHVICATPDLEFDEFCRK
LVLDIFPCFDTFKDEETTWNYVNSNLGFVAEQLIGLDGIVFSEITSIKSIVHKCNVDVAK
ALDRKACGSFLSLDDKNWRIQQCQSAETRKKPEIDIPQVWNSGTSNPAFKRWKKEKAKRE
RKKQPLPQLKSCEDLAKEDVGFTKTKLGYNIWTDYHSKKMGREESMDVEHGKPGTMEHDK
TEVGKEVTTMELEHVKPESRMGCRQEESGEVEHGKPESTMEIRKEQSMEVEHDKPVSGPK
TSEKMVMWIKAPIHDPVSGDMLFGGASLNGETLSVKEVALVKENGCDILVLVQYMYQRSD
ESNMAHGRVLVKGCDTFLGNAANPKEVFLNERCIDFKLENVKRKVKLDLRLVPHKKDESA
EFFCGNVYLKENRAFLRIQKKELEQAMGKCSVCTEREALVPLKLERGDYVYVKAVFWGYD
DIKRPHVVCEVLNVYEEASPSSRINEVWMEVRRFYRPEDISAKTSYEADLRE
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcattcgtttccccaaagaacaaaaggaaaagatctgtatctccccaagga
aggaaaagaagattgtcttggactgattcagaaattatttcaggacccattgcaccttct
tccacttcgatggaggaatcagaacccaccataacttcttgctctggttcacaagagaat
ttggagacaattccaggtttgttatctggtttggaagggaaagaaggtcatgtacatggt
ttttgctctgcatctgaagagaaacctcaagccatgaaggcttcaggaaagagagccgca
tccacggatcttccttatggtagttcaaagagagtaaaacccatttcagttgatcctttg
aatttcaaagaaacagacgcctctttatcaggagctgctatgtctctcttgacatcagga
gccacgaagacttcatccactggtcaaggaaatgaacccaaatccttggtcgaacgcaat
gtgggctcttcctcggcttccaaaccatcaaaagattctgattcaaatgagaaccctgac
ctcaccattcaagaggagcaacgttcacaagaaaaactagaaggagaagatcaagaatta
gaaggagaagaagaagtaggagaaggaaagggtgtggttattccttttgagggatgtaca
tcagaaaatttacggtttcggtgtgggccttttgggcccgttagatcatggtgtattaca
ggctttcgtggaatgttcctctctatttgggtctcaacaggattggccgattacctatgt
gtaatgcctagagaaagctacttccattactatagctgcttcaaatttaaggcttcactc
tgttttcgaacctttcaggaactcactttggataaagaggtggaatttggggatctttta
tcacttctggccttaaatatgctagacgattgcccaggttatgctgactttaacttgatg
tcggacgcagcgaagcctcatatggcttttgtagctgaccagttggttgcgcttgatgag
catttctctgagtttaaggtgataaaaatgataaatgaggagttcaaggaggatatggag
aagatcagaattcttaggcaagcgaatatggtgagcggaaggaaattttcaggctctttc
tactcgatccaaaactgcaatgaagagtttaccaaggcgagctcaaaagataatgatggt
gagaaagccaggagaggggccacttcctcccaaacttctttggaggaggagaagcatcat
cctcctaagaagcaatctcttcctacgattattgagagccaggagaagaacatagaaaca
ataaagaagacggccttggatgttaggaaaaaaacagaagaaatagaggtggttaatgac
gaatatgtcgcagttagcattactgggaccacaaattccaagactactaaggaccaaaga
aggctcaagggatttgagatgttggacaagggagaagtcatgcagccctttgaaaattta
gaagctgatcgaatgtacatcacctctgagatttggacaagctacaattcggaagaaccc
gacctaggggttcggtgcaagtcctttggtccagccttatcttggtgcattacaggctat
gagaaggaggcccctgagatatgggtgtcgacagaaatggcagactacctttgtcaaaag
ccaagtgcagattacatgcctttctttaagcctttctatgagaaggcaatgctctgcatc
caggcctttcatgtcatctgtgcgactcctgatttggaatttgatgagttctgtaggaaa
ctggttttagatatatttccctgttttgacaccttcaaagatgaagaaaccacttggaac
tatgtgaattctaacttgggtttcgtagccgagcagcttattgggcttgatgggatagtc
ttctctgaaataacatcaataaaaagtattgtacataagtgcaatgtggatgttgcaaag
gcattggatagaaaggcgtgcggttcatttctttcactcgatgacaagaattggcggatc
caacaatgtcaatcagcagagaccaggaagaagccagagattgatattcctcaggtttgg
aattcagggacttcaaaccctgcgttcaagagatggaagaaggaaaaggcaaagagagag
aggaaaaagcagccattgccacagttgaaatcatgtgaagatttggcgaaggaggacgta
ggttttactaaaaccaagcttggatacaatatttggacagactatcactcaaaaaagatg
gggcgagaggagagcatggatgtagagcatggtaaaccagggactatggaacatgataaa
acagaggttggtaaggaggtgactaccatggaactggagcatgtaaagccagagtctcgt
atggggtgtaggcaagaagagagcggggaagtggagcatggtaaaccagagtccaccatg
gagattaggaaagaacaaagcatggaagtggagcatgataaaccagtgagtggtccaaaa
acttctgagaaaatggtgatgtggatcaaggcaccaatccatgatccagtgtctggtgat
atgttgtttggaggagcatccctcaatggagaaaccttgagtgttaaagaggtggcattg
gtcaaagaaaacgggtgtgatattttggtcctagtgcagtatatgtatcagaggtctgat
gagtccaacatggctcatgggagagttttagtgaaaggttgtgacactttcttagggaat
gcagcaaatccaaaggaagttttcttgaatgagagatgcatagatttcaagctagagaat
gtaaagagaaaggtgaaactagacttgaggttggttcctcacaaaaaggatgagtctgct
gaattcttttgtggcaatgtttatctgaaggagaacagggcctttttaaggattcagaag
aaagaacttgagcaagcgatggggaagtgttcggtttgcacagagagagaggctttggtt
cctctgaagttagagagaggagattatgtgtatgtaaaggctgtgttttgggggtatgat
gacattaaaagaccacatgtggtttgtgaggttttgaatgtatatgaagaagcctcacca
tcgtctcggatcaatgaagtgtggatggaagtgagaaggttttacaggcctgaggacatt
tctgccaagacttcttatgaggcagaccttagagaa
DBGET
integrated database retrieval system
