KEGG   Amborella trichopoda: 18425468
Entry
18425468          CDS       T02990                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
atr  Amborella trichopoda
Pathway
atr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    18425468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atr03400]
    18425468
DNA repair and recombination proteins [BR:atr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     18425468
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA_2 FHA
Other DBs
NCBI-GeneID: 18425468
NCBI-ProteinID: XP_011629341
LinkDB
Position
Unknown
AA seq 677 aa
MSGDRVKIGLLVPLNNGQEEDGMLAKLPVFQGDNVIGRNDLGTTDKRVSRKHISLNAMDD
GSVEVVVEGPNPAIVKSGVQRNKLGPKNKTVMVHGDVLELIPGKHCFKYMVVDCDKQTSV
SKMSSHDPLEVKEASVERTLSTVKRKWQDPEHEEFVQDEVPNKLSTEAVNKSVTVNSGQS
GYKKLKKESASIDSLEAICQFNVQRDKLPLTFRLLQVQGLPEWANTSSVKIRDVIQGNVL
FAILSNYMVDLDWLLSACPMLKRISHVLVVHGESGGALDQMSKTKPSSWILHKPPLPISY
GTHHSKAMILVYPRGVRIVVHTANLIYVDWNNKTQGLWMQDFPWKDEKDLNKQSAFENDL
VEYLEALKWRPLRANLGSLGNANITASFFGRFDYSSATVRLIASIPGYHQGPKLNKWGHM
KLKTILKESKFEKEFLGSPLVYQFSSLGSLDDKWMTELSLSMSSGTSDDGIPLGLGKAQI
IWPSVEDVRCSLEGYAAGSCIPGPQKNVEKDIMRKYWSRWKADHTGRCRAMPHIKTYTRY
NGQSLAWFLLTSANLSKAAWGALQKNCSQIMIRSYELGVLFLPSLIRKQCLGFSCTDDSS
SSRDLEKYELPSTSEEGKTKLVTLCWQANESEELSSEIVPLPVPYKLPPEPYTSKDVPWS
WDRRYHKPDVYGNVWPH
NT seq 2034 nt   +upstreamnt  +downstreamnt
atgtctggagacagggttaagattggtttattggttccccttaacaatggacaagaggaa
gatggcatgttagcaaaactacctgttttccaaggagacaatgtcataggtcgcaacgat
cttgggacaactgataaaagagtaagccgcaagcatatcagtttgaatgctatggatgac
ggttctgttgaagttgtggtggaaggaccaaatccagccattgttaaatctggggttcag
aggaataaactgggtcctaaaaataaaaccgtaatggttcatggagatgttcttgagttg
attcctggaaagcattgctttaagtacatggttgtggattgtgataaacaaacctctgtt
tccaaaatgtcttcacatgatccacttgaagtgaaagaagctagtgtggagaggactttg
agtacagtcaaacggaaatggcaggatcctgaacatgaagaatttgtgcaggatgaggta
ccaaataaactctccacagaggcggttaataaatcggtaactgtcaattctggacaatct
ggttacaaaaaactgaagaaagaatctgcatctattgatagcttggaggccatttgccag
ttcaatgttcagagagataaattacctttaacatttagacttctacaagtccaagggcta
cctgaatgggcaaatacctcgtcagtaaaaattagggatgttatccaggggaatgtgctc
tttgccatcctttcgaattacatggtggacttggactggttgctatctgcctgccctatg
ctaaaaaggatatctcatgttcttgtggttcatggagaaagcggtggtgcattggatcaa
atgagtaagacgaagccttcaagttggattctgcacaaaccacctctacctatttcttat
gggacacaccattcgaaagctatgattcttgtttaccctagaggggtgcgtattgtcgta
cacactgccaatttaatttacgttgactggaacaacaaaactcaaggattatggatgcaa
gacttcccatggaaagacgagaaagatctcaacaaacagtctgcttttgaaaatgacctg
gttgagtatcttgaagcactcaagtggcgtccactgagggcaaatctgggatctcttggc
aatgccaatatcacagcatcattctttgggagattcgattacagcagcgcaacggtacga
ctgattgcttctattcctggctatcaccaagggcccaagttgaacaagtggggccatatg
aaactgaaaactattttgaaggaaagcaaatttgagaaagaattcctgggttctcccctt
gtttatcagttttcctctcttgggtctctggatgacaagtggatgacagaactatctttg
tcaatgtcttctggcacatcagatgatggaatccctttaggattgggtaaagcacaaata
atatggccatctgtagaagatgttcgctgttcccttgagggttatgctgctggcagttgc
attcccggccctcaaaagaatgtagagaaagacattatgaggaaatattggtccagatgg
aaagcagatcacactggacgctgtcgtgcaatgccccacataaaaacatacacccgttat
aacggccaaagtcttgcttggtttcttctaacatcagcaaatctcagcaaagctgcttgg
ggtgcactacagaaaaattgttcccagattatgattcgttcttacgagcttggagttctt
ttcttgccatctctgattcgtaaacaatgtcttgggttctcttgcacagatgatagcagc
tcctctcgggatttggaaaaatatgaactgcccagcacttcagaagagggtaaaactaaa
ttggtaaccctttgctggcaagcaaacgaaagtgaggaattatcctctgaaatagtccca
ttgcctgttccatataaactccctccggagccatacacctctaaagatgtgccatggtca
tgggataggcggtaccataagcctgatgtatatggaaacgtttggccacattga

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