KEGG   Amborella trichopoda: 18425540
Entry
18425540          CDS       T02990                                 
Name
(RefSeq) ras-related protein RABF2b isoform X2
  KO
K07887  Ras-related protein Rab-5A
Organism
atr  Amborella trichopoda
Pathway
atr04144  Endocytosis
atr04145  Phagosome
atr04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:atr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    18425540
   04145 Phagosome
    18425540
   04148 Efferocytosis
    18425540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atr04131]
    18425540
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atr04147]
    18425540
   04031 GTP-binding proteins [BR:atr04031]
    18425540
Membrane trafficking [BR:atr04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    18425540
 Endosome - Lysosome transport
    18425540
Exosome [BR:atr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   18425540
  Exosomal proteins of other body fluids (saliva and urine)
   18425540
  Exosomal proteins of colorectal cancer cells
   18425540
  Exosomal proteins of bladder cancer cells
   18425540
GTP-binding proteins [BR:atr04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    18425540
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA AAA_24 ATP_bind_1 RsgA_GTPase ATPase AAA_16 TsaE MMR_HSR1 SRPRB MMR_HSR1_Xtn
Other DBs
NCBI-GeneID: 18425540
NCBI-ProteinID: XP_006830139
UniProt: W1NRB8
LinkDB
Position
Unknown
AA seq 200 aa
MARNGSKSVQAKLVLLGDMGTGKTSLVLRFVKGQFFDFQESTIGAAFFSQTISLNEATVK
FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDITSMDSFLRAQKWVQELQRQGNPTLFMVL
VANKVDLASKRKVEEKDGETYARENGLLYMETSAKTAQNVNELFYEIAKHLAKTSPSHPT
GMKLHNNTEDKGRRIFCCSA
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcaaggaatgggagcaaaagcgtacaggcaaagctggtacttcttggcgacatggga
actggaaaaacaagtttggtactgagatttgtcaaaggccaatttttcgattttcaggaa
tcaacaataggtgcagcattcttctctcaaacgatatctttaaatgaagccactgtgaaa
tttgatatatgggacacggcaggacaagaaagatatcatagcttggctcccatgtattat
cgtggcgcagctgcagctgttgttgtttatgatattacaagcatggactcatttcttcgt
gctcaaaaatgggttcaagagcttcaaagacaaggaaatccaactttgtttatggtgtta
gttgctaataaggttgaccttgcatccaagagaaaggtggaagaaaaggatggggagact
tacgctcgagaaaatggattgctttacatggaaacttcggcaaagactgcacaaaatgtg
aatgagctcttctatgaaattgcaaaacacttggcgaaaactagcccctctcatcctact
gggatgaagctacacaacaatactgaggacaagggaagaagaatattttgttgctcagca
tga

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