KEGG   Amborella trichopoda: 18425596
Entry
18425596          CDS       T02990                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
atr  Amborella trichopoda
Pathway
atr03013  Nucleocytoplasmic transport
atr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    18425596
   03015 mRNA surveillance pathway
    18425596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atr03019]
    18425596
   03041 Spliceosome [BR:atr03041]
    18425596
Messenger RNA biogenesis [BR:atr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     18425596
Spliceosome [BR:atr03041]
 Complex C
  Other components
   EJC/TREX
    18425596
SSDB
Motif
Pfam: Pinin_SDK_memA
Other DBs
NCBI-GeneID: 18425596
NCBI-ProteinID: XP_006830190
UniProt: W1NNU8
LinkDB
Position
Unknown
AA seq 426 aa
MGSAAVEKTAEELRKEIEELNRQQWEITERLRDPRGLRRGLAANISNANATGIHTRRNHS
ALTNPPRRPRGVPERDRADAEGDDQPPPKRRLSSAVVKVKDGELVDDSKEKAINNEQADK
EDGAEDNFIDDKRLQKGPAGLRRDSGRTFRADVEALPVDQVPRVLPKDEDPNLVKRNKRM
FVQLLGTLEKFREEDMHLSSTKAYMRRSDSLRRAEQRAREESERLRQQEREQLAEKRRRD
LALRARVTAKAEEKKLELLFLHWSEHHKRLCNFLRTKSEPPIFYLPAKPLEGDPTLVDQR
KERSFQEWKDARRAELSEYQKHIEEQYLANVEAELERWQNANARSNTSRVNNAANLQETM
DKELESHRQAHGPKNTSRIPRGGEVDEDVEDDDDMLMMMDDVLQQPEADDDIKDAGNAVP
LEGGSN
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgggaagcgccgcagtggagaagacggcggaagagctccgcaaggagatcgaagaactc
aaccgccaacaatgggagatcacagaacgtctacgcgatccaagagggttgaggcgcggc
ttggcggccaacatttcgaatgcgaatgccactggcatacacacgcgccgcaatcattca
gcactgaccaatcctcctcgacgcccacgaggagttccagagagagatagagccgatgcc
gagggtgatgaccaacctcctcccaaaaggaggctctcttcagctgttgtgaaggtcaaa
gatggagaacttgtggatgattcgaaagagaaagcgatcaacaacgagcaagcagataag
gaagatggtgcagaggataatttcattgatgataagaggctgcagaagggccctgctgga
ttaaggcgtgatagtggcaggacctttagggcggatgttgaagctttgcctgtggatcag
gttcctagagtattgccgaaggatgaggatcccaacttggtaaaaagaaataaaaggatg
tttgtacagctgctgggaacattagagaaatttcgggaggaagacatgcatttgtcatca
acaaaggcatacatgcgcagatcagattcattgcgaagagctgagcaacgggctcgtgaa
gaaagtgagagattgcggcagcaagagcgcgaacaacttgcagaaaagcgaagacgagat
ctggcccttcgagcacgtgttactgcaaaggcagaagaaaagaagttggagttgctcttt
ctacactggagtgagcatcataaaaggctttgcaatttcctaaggaccaagtctgagcca
ccaatattttacttacctgctaaaccactagaaggtgatccaaccttggttgaccaaaga
aaagagcggtctttccaggaatggaaggatgctagacgagctgagttgtcagaatatcag
aagcatatagaggagcagtatcttgcaaacgtggaggcagagcttgagaggtggcagaat
gctaatgctaggagcaacacaagtagggtaaataatgcagcaaatttacaggaaacaatg
gacaaagagcttgagagtcacaggcaggcccacggccccaagaatacttcgaggatccca
aggggtggggaagttgatgaggatgttgaggatgatgatgacatgcttatgatgatggat
gatgtgctccaacagcctgaggctgatgatgacataaaggatgcaggtaatgctgttccc
cttgaaggtggcagcaattga

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