Amborella trichopoda: 18425624
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Entry
18425624 CDS
T02990
Name
(RefSeq) uncharacterized protein LOC18425624 isoform X2
KO
K03504
DNA polymerase delta subunit 3
Organism
atr
Amborella trichopoda
Pathway
atr03030
DNA replication
atr03410
Base excision repair
atr03420
Nucleotide excision repair
atr03430
Mismatch repair
atr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
18425624
03410 Base excision repair
18425624
03420 Nucleotide excision repair
18425624
03430 Mismatch repair
18425624
03440 Homologous recombination
18425624
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atr01009
]
18425624
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atr03032
]
18425624
03400 DNA repair and recombination proteins [BR:
atr03400
]
18425624
Protein phosphatases and associated proteins [BR:
atr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
18425624
DNA replication proteins [BR:
atr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
18425624
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
18425624
MMR (mismatch excision repair)
DNA polymerase delta complex
18425624
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
DDDD
QLQ
Motif
Other DBs
NCBI-GeneID:
18425624
NCBI-ProteinID:
XP_006830231
UniProt:
W1NPD7
LinkDB
All DBs
Position
Unknown
AA seq
527 aa
AA seq
DB search
MGHGGFNSSEILNEIQTLISDRLQVVSYKWLSRNFSVSSNIAKRLLQEFVDCHGDGLEVI
YALSGWSTSKHPYYSIRLVSRFNLDEVQREFKDGCSVQVYSVQPCIPKDPTELWNAEFVQ
AEELFNQPSTVENCLRDNRFSAVSNSFVKRNTSGAPLRVGHPEPKKGSDVAVPSRNNGIV
LKRQMDPQAQKEKAPQTSTEEGLQEKAAVIVIKNQGAQQIHNQGGRPQVDTIHVGKKKTT
NDKSSSAGSLASLWDRASAKSKPSSDQIDSVESVPKTILSAEGHIRAREAVEEMSSGDEE
EGFSRRRISNNGGNGRKRRVVFCPSDDDDDDDEIVVSIATPEPPKSRSVFGAEAGINNSG
SALEKMDMHTKEQNSDGHLKEKQQHRDNGVRTTEKIEDASKGVVSKVPSSEVIRGHINGE
QNNEDKNAAIAPAGPPKRRKVLKTRIDERGREVTEVVWEGDADDSSNTAKEAITNNTDNR
STAAPKAPAPVKAAPFNPPAKGGVKKPAKGGVKDPKQGNILSFFKKA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgggccatggcggtttcaattcctcagaaatcctcaacgaaatccaaaccctaatttca
gatcggctccaagtggtatcatacaagtggcttagccgcaatttctctgtatcatcaaac
attgctaaaagactgcttcaagagtttgttgattgtcatggagatgggttagaagtaatt
tatgcgctatctgggtggtcaaccagcaaacatccatactactccataagactggtgtca
aggtttaaccttgatgaagtccagcgggagtttaaagatggttgttctgttcaggtatac
agcgtgcaaccttgtatcccaaaggatcccacggaactctggaatgccgaatttgtacag
gcagaggagctctttaatcagccttcaactgtggaaaactgtttgagggataacaggttc
agtgcagtttcaaactcttttgtcaagcgcaacactagtggagcacctttgcgtgttggg
catccggagcctaagaagggttcagatgtggcggtcccgtcacgaaataatggtattgtg
cttaaaaggcaaatggatcctcaggcacaaaaggaaaaagcaccccaaacaagtacggaa
gagggcttacaggagaaggctgcagtaatagtcataaaaaatcaaggtgcccaacaaatt
cataatcagggtggtaggccacaagttgacacaattcatgttggtaaaaagaaaaccact
aatgacaaaagctcatctgcgggatctcttgcaagtttatgggaccgtgcatctgcaaaa
tcaaagcctagctctgaccagatagattcggtcgagagtgttccaaaaaccatattgagt
gctgaaggtcatatacgtgcccgtgaggcggtggaggagatgagtagtggcgatgaagag
gaaggcttttcacgaagaagaatatcaaataatggtggaaatggaaggaagcggagggta
gttttttgtccttcagatgatgatgacgatgatgatgaaattgttgtaagcattgcaaca
ccagagcctccaaaaagcagatcggtttttggagctgaagctggtattaataactctggg
tctgctctggagaaaatggatatgcatactaaagagcagaatagtgatgggcatctgaaa
gagaaacagcaacatagagacaatggtgtgaggacgactgagaaaatagaagatgctagc
aagggtgtggtgtctaaggtaccttcgtctgaggtgattcgtggtcatattaatggagaa
caaaataatgaagataagaatgctgccatcgctcctgcaggcccacctaagcggagaaaa
gttctcaagacacggattgatgagcgggggagagaagtgactgaggttgtatgggaggga
gatgctgatgacagcagtaacacagccaaggaggcaataactaacaatactgacaacagg
tctactgcagcacctaaagcaccggctccagtgaaggctgctccatttaatccccctgct
aagggtggtgttaagaaacctgccaaaggtggagtgaaggatcctaaacaaggaaacatc
ctttcattcttcaaaaaggcttga
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