Amborella trichopoda: 18425707
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Entry
18425707 CDS
T02990
Name
(RefSeq) LOW QUALITY PROTEIN: alpha-mannosidase
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
atr
Amborella trichopoda
Pathway
atr00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
18425707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18425707
Enzymes [BR:
atr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
18425707
Membrane trafficking [BR:
atr04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
18425707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
18425707
NCBI-ProteinID:
XP_020517815
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MVVVRRLLLVVLLVALLDCGHGAYITYNTSAGPVKGKLNVHLVAHSHDDVGWLKTIDQYY
VGSNNSIQGACVRNVLDSVIVSLVNDPNRKFVFAEQAFFQRWWVEQCAAVQEQVKKLVDS
GQLEFINGGWCMHDEATCHYIDMIDQTTLGHRLIKKQFNKVPRVGWQIDPFGHSAVQAYL
FGAELGFDSLYFARIDYQDREKRKDEKSLEVIWRGSKTFGSSSQIFTGAFPIHYGPPTGF
HFEVNDDSAPIQDDPLLYDNNIAQRVNDFIDAATTQVNVTRTNHIMWTMGDDFQYQYAES
WFKQMDKFIHYVNKDGRVNAFYSTPSIYTDTKNAENESWPLKTDDYFPYADRANAYWTGY
FTSRPALKRYVRMLSGYFLAARQLEFFAGRNSSSVSTYSLGDSLGLXQHHDAITGTAKQH
TTNDYAKRLAIGASESEMVVSLALSCLTGSGSKKGCPASASTFRQCHLLNISYCPPTEDL
IPERKSLVLVAYNPLGWSRNEIVRIPVNNDRLVVRDSSGKMIEAQYVEVDNTTSRLRSLY
TKAYLGVPSNKVPKYWLLFQASVPSLGWSTYFISSSGNRSTVYRPGMDPLKNGTIEIGQG
AVKMTFSSVSGQLQHMSNKRTGVDVPVQQSYLWYGSSGGDQDPQASGAYIFRPNGSPPTV
ASRLVPLKILRGPVMDEVYQQFNPWISQVIRLFKDMEHAEVEFTIGPIPTDDGVGKEVIS
QITANMATNKVFYTDSNGRDFLRRVRDSRPDWSLQVNQPVAGNYYPLNLGIFMEDDKSEL
SILVDRATGGASIRDGELEIMLHRRMIFDDSRGVGEALDENVCMEDFCEGLTVRGHYYMS
IDPLGSGARWRRTTGQKVYSPLLLAFTHEEEQKWKHSHITKATLMDTGYVLPTNVAIITL
QELEDGSVLLRLAHLYEAEEDVEYSKMAKVELRKIFRGRMINEVRETSLSTNQEKSEMRK
MQWRVEGDDGGEKPGPSIKGGPINVETLVVELGPMEIRTFLLKFS
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggtgcggaggttgcttcttgttgtgttattggttgctttactggattgtggt
catggggcgtacattacatacaacacgagtgctggccctgtaaaaggcaagctcaacgtg
catttggttgcacattcacatgatgacgttggttggctcaagaccattgatcaatactat
gttggttcaaataacagtattcagggtgcttgtgtgaggaatgtgctcgattccgtcatt
gtttcgttggttaatgatcccaataggaagtttgtctttgccgaacaagcattctttcag
agatggtgggttgaacaatgtgcagcagtgcaagaacaagtgaagaaattggtggattct
ggccaattggagtttataaatggtggttggtgtatgcacgatgaagcaacatgtcattac
attgacatgattgaccagacaactctgggtcatcgtttgataaagaagcaatttaacaag
gtcccacgtgttggatggcaaattgatcctttcgggcactcagcagtgcaagcatacttg
tttggggcagagcttggtttcgactctctatattttgcaaggatcgattaccaggataga
gaaaagcgtaaagacgagaagtctctagaagttatatggagagggtcaaagacttttgga
tcatcatctcaaattttcacgggagcctttcccattcactatggtcctccaactggtttc
cactttgaagtcaatgatgattctgctcctatacaggatgatcctctcttatatgataac
aatatagcacaacgtgttaatgattttattgatgctgccacaactcaagtaaatgtgaca
cgtacaaaccatatcatgtggacaatgggtgatgacttccaataccaatatgctgagtct
tggttcaagcaaatggacaaattcatccactatgtgaacaaggatggcagagtcaatgcc
ttctattctactccttctatctacactgatactaaaaatgctgagaatgaatcatggcca
ttgaagactgatgattattttccttatgcagaccgagcaaatgcttattggactggatat
ttcaccagtaggccagcactcaaacgatatgtccgtatgctaagtggatattttctggca
gcacgacaacttgaattttttgctgggaggaattcatctagtgtgagcacttatagctta
ggagactctctgggattgntgcagcatcatgatgctatcacgggtacggctaaacagcac
acaacgaatgattatgcaaaacgacttgctataggagcatcagagtcagagatggttgtg
agcttagctctttcatgccttactggttctggatcaaagaaaggatgtccagcttcggca
tcaacattccgccagtgtcacttgcttaacataagctattgtcctccaacagaggattta
attcctgaaagaaagagcttggttctagtggcatacaatccccttggttggagtcgcaac
gagatcgtccgaattccggtaaacaatgatcgtcttgttgtacgggattctagtgggaag
atgattgaggcacaatatgtagaagttgataatactacgagcagattaaggagcttatac
acaaaggcatatctgggagtaccttctaacaaagtcccaaaatattggcttttgtttcaa
gcctcggtgccatcattgggatggagcacctactttatttccagttctggaaatagatcc
accgtgtatagaccaggaatggaccctttgaaaaatgggacaattgagattggtcaaggg
gctgtgaagatgactttctcatcagtgtccggacagcttcaacacatgtctaataaaaga
actggagtggatgtacctgttcaacagagctatctatggtatggttcaagcggtggggac
caggacccacaggcatccggtgcgtacatattccggccaaatggttctcctccaacagtt
gcctctagattggtaccattgaagattcttaggggaccagtaatggatgaagtgtatcaa
caatttaacccatggatctctcaggtgattagacttttcaaagacatggagcatgctgaa
gttgaattcactattggtcctattcccacggatgatggtgttggaaaggaggtcatctct
cagatcacagcaaatatggcaaccaacaaggtgttttatacagattccaatgggagagat
tttctaagacgggtgcgggattctcgaccagattggtctttacaagttaatcaacctgta
gcagggaactactatccacttaatcttggaatatttatggaggatgataagtcagagctc
tcgatattggtagatcgagccactggcggtgcaagtattcgagatggcgaacttgaaatt
atgcttcacagacgtatgatcttcgatgactctcgaggagttggagaagcacttgatgag
aatgtttgcatggaagatttttgcgagggactgacggttcgaggacattattacatgagt
attgaccctttagggtcaggagcacgatggcgtcgaacaaccggtcaaaaagtttactca
ccacttctcttagcttttactcacgaggaagagcaaaaatggaaacattcccacatcaca
aaggcaacacttatggatactggctatgttcttccgacaaatgttgcaattattaccctt
caggaattggaagatggaagtgtgcttctccggttggctcatctgtacgaggctgaagaa
gatgtcgagtactcaaaaatggccaaagtagaactgagaaagattttcagaggaaggatg
ataaatgaagtgagggagacaagcctatctaccaaccaagagaaatctgagatgaggaag
atgcagtggagagtggaaggcgatgatggtggggagaaacctgggccttcaattaaagga
ggtcccatcaatgtagagactctggttgtggaactgggtcccatggaaatccgcaccttt
cttttaaaatttagctaa
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