Amborella trichopoda: 18425826
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Entry
18425826 CDS
T02990
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18425826
Enzymes [BR:
atr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18425826
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18425826
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
AF_0924
Motif
Other DBs
NCBI-GeneID:
18425826
NCBI-ProteinID:
XP_006830423
UniProt:
W1NSJ5
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MASNLFKGDRGEFVYIPLLCIIVSLVVGMSSASVVLIGQNVSLSFDDIEANFVPSIKGSG
VCGTLYVAEPLDACTPLTDKNISVEGANSRFALIIRGGCTFEDKVRTAQKAGFQAAIIYD
NEDSGILVAMAGNSAGVKIHAIFVSKASGEVLKTFAGTSGLELWIIPNFENSAWSIMAIS
FISLLALSAVLATCFFVRRHRIRRERPQTPHVREFHGMSSRLVKALPSLIFTSVLEDNCT
AGTCAICLEDYAPGDKLRVLPCCHKFHAMCVDSWLTIWRTFCPVCKRDARTGTGEPPASE
CTPLLSPTSSSMASSVPSSSAASPAIQIGRSGSFRSPNSSRASSLSMTATSYMPHSHRSN
SFSSSLSISRSSYNIRNFPSSSQRSRHSLGYPPLDPRLASPYIPSPSNASPLYAESSSER
LPSLLYCSGSAASISPLASAHSLPGC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggctagcaatttgttcaagggagatagaggggagtttgtttatattccccttttgtgt
ataattgtctctctggtggtgggcatgtccagtgcaagtgtagttttgattggccaaaat
gtgtccttgtcttttgatgacattgaggcaaactttgttccttcaattaaaggatccgga
gtatgtgggaccttatatgtagctgaacctctcgatgcgtgcactccattgactgacaaa
aatatctcagttgaaggtgctaactcgcgatttgcattgattattagaggaggatgcact
tttgaggataaagttaggactgctcagaaagcaggattccaagcagctattatttatgac
aatgaagatagcggtatattggttgcaatggcagggaattctgcaggtgtgaaaatacat
gcaatatttgtttccaaggcatcgggtgaagtactaaaaacctttgcgggtacatcagga
ttggagctatggataatccctaattttgaaaactctgcgtggtctatcatggccatctct
ttcatatcgctacttgcattgtctgctgtgcttgcaacatgtttctttgttcgtaggcat
cgcatacgacgagaaaggcctcagacccctcatgttcgtgagttccatgggatgagcagc
cgattagtgaaggcattgccaagcctcattttcacttctgtgctagaagataactgcaca
gctggaacatgtgctatatgcctagaggactatgctccaggggataagctaagagtgttg
ccatgttgccacaagtttcatgccatgtgtgtggattcctggttgacaatctggagaaca
ttttgccctgtatgcaagcgcgatgcaaggacaggcaccggtgaacccccagcttctgaa
tgcacccctctcctttcccctacctcctcctcaatggcctcctcagtcccatcttcctct
gctgcttcacctgccatacaaataggaagaagtggatcattcaggtctcccaactcctct
cgtgctagttccctctcgatgacagccacctcttacatgcctcattcacatagatctaac
agtttctcatcgtctctaagcataagcaggagctcctacaacatcaggaattttccatct
tcatcgcagagatctcgccattccttgggctaccctcctcttgacccaagacttgcatcc
ccatatatccccagcccgagcaatgcctctccgctgtatgcggaatcatcatcagaacgg
cttccatccctgttgtattgcagtgggtcagctgcaagcatctctcctctagcctctgcc
cactccttacctggttgctga
DBGET
integrated database retrieval system
