Amborella trichopoda: 18426203
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Entry
18426203 CDS
T02990
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13 isoform X1
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atr03009
]
18426203
Enzymes [BR:
atr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
18426203
Ribosome biogenesis [BR:
atr03009
]
Eukaryotic type
Pre-60S particles
Helicases
18426203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
18426203
NCBI-ProteinID:
XP_011620421
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MDIPSKRKAKTRKRKVNQESETTYVDTLQWSSSLPDDDLFSFLVGSNEGGFLSLEELDES
AFDFSQAKLKKEGTFVPVSDELRSDIMESTGDISSEKKVKKKKKKNSKKSKSENEVGTFV
PVSDELHYDIMASTGEISSKQKVKKKKKKKKNSNKSKIKNVEETVSTKETVSEFDQKDTP
LASIIEGESNGQFNNLGNETLDLDDEFSAWNELRLHPLLLKTIHRLEFKEPTPIQRACIP
AAAHQGKDVIGAAETGSGKTLAFGLPIFQRLLEEQEKAARYSNKGEDGGEKGVCEKCLRA
LIVTPTRELALQVSDHLKAFSKLTNILVVPIFGGMSAEKQERLLKRRPEVIVGTPGRLWE
LMSGGDVHLTELQLLSFFVLDEADRMIENGHFHELQSIIDMLPLVGDQSGGEPAPSPSSG
DNKLHSIKKNDNCLTVAKMQKKKRQTFVFSATIALSANFRKKLKRGANLRSASNDGLSSF
ENLSQRAGMRADAAIIDLTTSSIVAYKLEESVIECREEDKDSYLYYLLSVHGFGRTIVFC
TSIAALRRISSLLRIVGVNAWTLHAQMQQRARLKAMDHFRSSDHGVLAATDVAARGLDIP
GIRTVIHYQLPHSAEVYIHRSGRTARASSDGCSIALISPSDRSKFASLCKSFSKECLRRF
PLDSSYMPEIAKRMSLARQIDKITRSDSQTKAQKNWFVRNAASVEMDLEDSGSEEEKVQI
SKQKKINTFQLKQLEQELNVLLTRPLQPTTFSRRFVAGAGMSPLLQQQLKEMTAKKQSMG
KQKNNNTKESKRPRLVVIGQNCIEPLQALRRHDT
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggatataccttctaagagaaaagcgaagacaaggaagcgaaaagttaaccaagagtcc
gaaactacttatgttgatacccttcaatggagtagctctctccctgacgatgaccttttc
tctttccttgtcgggagcaatgaaggaggttttctctccctagaagagttagatgaatct
gcgtttgatttcagtcaagcaaaactgaagaaggaagggacctttgttcctgtatcagat
gaacttcgctctgatataatggaaagtacaggagatatatcaagtgagaaaaaggtgaag
aagaagaagaagaaaaattcaaaaaagagtaagagcgagaatgaggtagggacctttgtt
cctgtatcagatgaacttcactatgatataatggcaagtacaggagagatatcaagtaag
caaaaggtgaagaagaagaagaaaaagaagaaaaattcaaacaagagtaagatcaagaat
gtagaagagactgtatccacaaaagaaactgtatcagagtttgatcagaaagataccccc
cttgcatctataatcgagggggaaagtaatggtcaattcaataaccttggtaatgaaact
ctagacttggatgatgagttttctgcatggaatgagctgaggcttcaccctttgttgttg
aaaactattcacagactggaattcaaggaacccacacccatacaaagggcttgcattcca
gctgctgctcaccagggaaaggatgtcattggtgctgcagagactggatctggaaaaacg
cttgcttttgggctgccaatttttcaacgcctacttgaggaacaagagaaagctgcacgt
tattcaaataagggagaagatggtggggaaaagggagtttgtgaaaaatgtttacgggcg
cttattgtgactcctacaagggagcttgcacttcaggtctctgatcatctgaaagctttt
agtaagctcaccaatatactggtggttcctatttttggtggaatgtctgcagagaagcag
gagagacttctaaagagaaggccagaggttattgttggaactcctgggaggctatgggaa
cttatgtcaggaggagatgtgcatctcactgagttacaattgctctctttttttgtactg
gatgaagctgataggatgatagagaatggccattttcatgagttgcaatccattattgac
atgctacctttggtcggcgaccaatctggaggagaacctgcccccagtccctcttcagga
gataataaactgcacagcataaaaaagaatgataattgtttgacggttgcaaaaatgcag
aaaaagaaaaggcaaacctttgtattttctgcaactatagcattatctgcaaacttccgg
aaaaagctaaagcgaggtgcaaatctgagatctgcaagtaatgatgggttgagttctttt
gaaaacctttctcagagagcgggaatgagagcagatgcagctattattgatttgactact
tcttcgattgtggcttataaacttgaggagtcagttatagagtgcagggaagaagacaaa
gattcatacttgtactatcttcttagtgttcatggatttggtcgcactattgttttctgc
acatcaattgcagccttacgccgtatatcatcccttttgcgtatcgttggtgtcaatgct
tggactcttcatgctcaaatgcaacaaagagctcgcttgaaggccatggatcattttcgt
tctagcgatcatggtgttcttgctgctactgatgttgcagctagaggacttgatatccct
ggcatccgaacagttattcactatcaattaccacattcagcagaggtttacattcacagg
agtggacgaacagctcgggcttctagtgatgggtgtagcattgcacttatttcaccgtct
gaccgatcaaagtttgcctctctgtgtaaatcattttcaaaggagtgtcttcgtcggttt
cccttagatagctcctacatgcctgagattgcaaagaggatgtctcttgcacggcaaatt
gataagataacacgctctgactcccagacaaaggcacagaaaaactggtttgtgcgtaat
gctgcatctgtggaaatggatctagaggacagtggaagtgaggaagaaaaagtacaaata
tctaaacaaaagaagatcaatacctttcaattgaaacaattggagcaggaattgaatgtg
cttctaactcgccccctacaaccaacgacattttcacgccgctttgtggcaggggctggt
atgtctcccctccttcagcaacagttgaaagaaatgactgctaagaaacaaagtatgggg
aaacaaaaaaataataacaccaaagagagcaagagacccaggcttgtggtaatcggtcag
aactgcatagaaccccttcaggcacttcgaaggcatgatacatga
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