Amborella trichopoda: 18426439
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Entry
18426439 CDS
T02990
Name
(RefSeq) cell division control protein 48 homolog D
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
atr
Amborella trichopoda
Pathway
atr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
18426439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18426439
03009 Ribosome biogenesis [BR:
atr03009
]
18426439
04131 Membrane trafficking [BR:
atr04131
]
18426439
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atr04147
]
18426439
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
18426439
Ribosome biogenesis [BR:
atr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
18426439
Membrane trafficking [BR:
atr04131
]
SNARE
SNARE associated proteins
Others
18426439
Autophagy
Aggrephagy
Other aggrephagy associated proteins
18426439
Exosome [BR:
atr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
18426439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_22
AAA_33
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
Parvo_NS1
Viral_helicase1
IstB_IS21
ABC_tran
AAA_17
AAA_18
NACHT
AAA_7
AAA_lid_PRS2_C
NB-ARC
AAA_24
TsaE
Vps4_C
DUF815
Zeta_toxin
Sigma54_activat
Sigma54_activ_2
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
18426439
NCBI-ProteinID:
XP_006833149
UniProt:
W1NRE0
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MAHQAESSDSKGTKRDFSTAILERKKAANRLIVDEAINDDNSVVSMHPDTMEKLQLFRGD
TILIKGKKRRDTICIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VSPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDIIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDESSRLQI
FKACLRKSPVSKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDLERERRRREN
PEAMEEDDTEEVAEIKACHFEESMKYARRSVSDADIRKYQTFASTLQQSRGFGSEFRFPE
RPDASTGVSGAEAFGVSGGTVDEDDLYN
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggctcatcaagcagagtcctcagattcgaaggggacaaagagggattttagcactgcg
atcctcgaaaggaagaaagcagcgaatcgattgattgtggatgaagctatcaatgatgac
aattcggtggtttctatgcaccctgatacaatggagaagttgcagctcttcagaggcgat
acaattctcattaagggtaagaagaggagggatacaatctgcattgctttggctgacgag
acctgtgatgagcctaagatcaggatgaacaaagttgtgaggtccaatcttagggttcgt
cttggggatgtggtttcagtgcaccagtgcccagatgttaagtatgggaagcgtgtccat
attctaccaattgatgatacaattgagggcgttactggaaatctatttgatgcttatctc
aaaccttatttcttggaggcatatcgtccagtaaggaaaggagatcttttccttgttagg
ggtggtatgaggagtgtggaattcaaagtgattgagaccgaccctgcagagtattgtgtg
gtttctccagatactgagatcttttgtgaaggggagcctgtaaaaagggaggatgaggag
agacttgatgaagttggttatgatgatgttggtggtgttaggaaacaaatggctcagatt
agggaattggttgagcttcctttgaggcatccacaactattcaaatctattggtgtgaaa
ccaccgaagggtatcctcctttatgggcctcctggttcagggaaaaccttgatagcaagg
gcagtcgccaatgaaactggtgcattcttcttctgtatcaatgggcctgagatcatgtcc
aaactagctggggagagtgaaagcaatcttaggaaggcttttgaagaagcggagaagaat
gcgccatctataatattcatcgacgagatagactccatagctcctaagagagagaaaacc
catggtgaagttgagaggagaattgtttctcagcttcttacacttatggatgggctaaaa
tctcgtgctcatgttattgtcattggagccacgaacaggccaaacagtattgaccctgct
ctgagaaggtttggaaggtttgatagggaaattgacattggtgttcctgatgaaattggg
cggcttgaggtgcttcgcatccacaccaagaacatgaagcttgctgaagatgttgatctg
gagagaatcgccaaggatactcatggatatgtcggagctgatcttgcagctttgtgcact
gaggctgctctccaatgcattagggagaagatggatataattgacttggaagacgaaacc
attgatgcagaaatactcaattcaatggctgttactgatgagcacttcaagactgctctc
gggacaagcaacccatctgcccttcgtgaaacagttgttgaggtacccaatgtgagttgg
gaagacattggtggtctggagaacgtcaagagagagctgcaagagactgttcaatatcct
gtggagcatccagagaagtttgagaagtttggaatgtcaccttcgaagggggttcttttc
tatggacctcctggctgcggtaagaccctacttgccaaggccattgccaatgaatgccaa
gccaactttattagtgtcaagggtcccgagctgcttacgatgtggtttggagagagtgaa
gctaatgtgcgggaaatctttgacaaggcccgccagtctgccccttgtgtcctcttcttt
gatgagttggattccattgctactcagagagggagcagcgttggagatgctggtggtgca
gcagacagggtgttgaatcagcttcttaccgaaatggatggcatgtcggccaagaaaact
gtctttattattggagcaaccaatcggcccgacatcattgatccagccttgttgaggcca
ggtcgtcttgatcagttgatatacattccgttaccagatgagagctcacgccttcaaatc
ttcaaggcctgcctccgaaaatctccagtctctaaagatgttgatctcaatgcccttgct
aagtacactcagggcttcagtggtgctgatattactgagatttgccaacgtgcatgcaag
tacgcaatccgggagaacatcgagaaggatctagagagagagaggcggaggagagagaac
ccagaggccatggaggaggatgacacggaagaggtggcggagatcaaggcatgccacttt
gaagaatcgatgaagtatgctcgccgcagtgtgagtgatgctgacattcgcaagtaccag
acatttgcatccacactccagcaatcgcggggctttggcagcgaattccgcttccctgag
cgtcctgatgcctctacgggggtttctggtgctgaggcatttggcgtatcgggtggtacc
gtggacgaagatgatctgtataattga
DBGET
integrated database retrieval system
