Amborella trichopoda: 18426498
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Entry
18426498 CDS
T02990
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atr01009
]
18426498
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18426498
Protein phosphatases and associated proteins [BR:
atr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
18426498
Membrane trafficking [BR:
atr04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
18426498
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
Reovirus_L2_MT2
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
18426498
NCBI-ProteinID:
XP_011620505
LinkDB
All DBs
Position
Unknown
AA seq
1058 aa
AA seq
DB search
MDRAPSQVGRPELEALADSKNNGFRDVRHEFSSSSLSKIQNLRNSRSNSLSKSSSELESP
SYGGGQSLASILNNPHLGKGGVYSSDASWVGWWPAPGANSIESTPLITPRTFPEINQADF
QPYLNSISESYGRFEDIRHHKDREKSVLEPKSRGAVGELRGQGEALVACLREVPSLYFKE
DFALEDGVTFKAACPFSSINENLVLQEKLSHYLDVVEVHLVKEISLRSDSFFEAQGHLQD
LNKKIVEACGRLRELKETIRILDIDVVENAQQIQELNRTRGNLLALQQKLRLILYVNQAL
STLKLLVAASDCAGALDVIDDLQHLLDGDELTGLHCFRHLRDQLTMSSDAINSILAAEFL
RAAIYDARELDRSILSKLPVKTADLSNGKEEEVKLDEDESSSLRDRLLPLIIGLLRTAKL
PSVLRVYRDTLISDMKTAIKTTVAELLPLLYGRPVESDLSTGERPADSDGGGLSLASKLR
NLSSESFVQLLAAIFKIVQAHLVRAAEVKKVIEWVMGGLDGSPAMDSVAAVVALGAAAAA
AAEAAQENVTQLSSPSLLQKNATKVQLLLGKANDISSPANISKNFIADVLRENAEAVFAA
CDAAHGRWAKLLGVRALLHPKLRLQDFLSVYNITQDFISATEKIGGRLGYSIRGTLQSQS
KAFVDFQHISRITKITAVLDQETWVAIDIPDEFQAIVDLFICSEAVIAEGEEGSLQLNPA
QQTNTIDGSRDDSAKAAYSQSLSRQNSVESSVEHVRHANTSSQSGGSQENTVESSPRPIT
ENDHHSSKGHDKSPSQKLFHKGVGYHMVNCGLILLKMLSEYTDISNNLPASSSEVVQRVV
EILKLFNSRTCQLVLGARAIQVTGLKSITAKHLALASQVVSFFYAIIPEIRRILFLKVPE
PRKALLVSEIDRVAQDYRVHKDAIHTKLVNIMKDRLPVHLPEMAKSWNQESDAQPSLHAR
QLTKEVGVLQRVLSRTLPEADVHIIFRQVVQVFHSEITATFSKMDVNSPEAKARMYRDIH
HILGCIHSLPTDDSSKDGVNSGQLDEFLAQRFGTDAVH
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggatagagcgccttcccaagtaggaaggccagagttggaggctctcgccgatagtaag
aacaatggattcagagatgtcaggcacgaattctccagtagttctctctctaagatccag
aacctgagaaactcacgttccaattcactatcaaagtccagttcagagctcgaatcccca
tcttatggtggtggccaaagcttggcttcgatcctcaataacccccatctgggaaaaggc
ggtgtctatagctccgatgcttcatgggttggatggtggcctgcacctggtgccaattca
atagaatcaacgccactaatcacccccagaaccttccctgagatcaatcaagctgatttc
caaccctatttaaattcgatctcagagtcttatgggcgtttcgaggacataaggcatcac
aaagacagagaaaagagcgttcttgaacccaagagtagaggtgcggttggtgaattgagg
gggcagggtgaagcccttgttgcttgcttgagggaggtcccttctctctactttaaggag
gactttgctctagaagatggggttacttttaaggcagcatgccctttctcttcgatcaat
gaaaacttggtgttacaagagaaattatcacattatttggatgttgttgaggtacatttg
gtaaaggagatctctttgaggtcggattcattctttgaggcacaagggcatttgcaggac
cttaataaaaagatagttgaggcttgtgggcgccttagagagttgaaggagacaataagg
atccttgacattgatgtagtggagaatgctcaacagattcaagaattgaataggacccgc
ggaaacttgttagctctccaacaaaaactcaggctcatactatatgtcaatcaagctctt
tccactctgaaattgcttgttgcagcttctgattgtgctggtgcactagatgttatcgac
gacttgcaacatctactggatggtgatgagctcactggtttgcattgtttccgtcacctt
cgtgatcagttaacaatgtcttcagatgcaataaatagcattcttgcagcagagtttttg
cgggcagcaatatatgatgcaagagaactggatcgatcaattttatcaaaattgccagtt
aagactgccgatcttagcaatggcaaagaagaggaagtcaagttagatgaggatgagagc
tccagtttacgagatcgacttcttcccctcatcattggattgcttagaactgccaaactt
ccatctgtactgagggtttaccgtgatacattaatttccgacatgaaaacagccattaag
accacagttgcagagttgcttccgcttttatatggacgaccagtggagtctgatttgtct
actggagagcggcctgctgattcagatggtggaggtttatcacttgcaagtaaattgcgc
aatctatcttctgagagctttgttcaacttttagctgcaattttcaagattgtacaggca
catttggtgcgggcggctgaagttaagaaggttattgagtgggttatgggaggccttgat
ggtagccctgctatggattctgttgcagctgtagttgctcttggtgctgctgcagcagct
gcggcagaagctgctcaagagaatgttactcaacttagttcaccatctttgcttcaaaag
aatgccaccaaggttcaattgcttctgggaaaggcaaatgacatttctagtccagcaaat
atatcaaaaaatttcattgctgatgttcttcgggagaatgctgaagcagtttttgcggct
tgtgatgctgcacatggaagatgggctaagttactgggtgtgcgtgcactcctacatcct
aagttacggctgcaagattttcttagtgtttataatatcactcaggattttatctcagca
acagagaagattggtggaaggttgggctacagcattcggggtactctgcagtcacagtcc
aaagcttttgttgattttcagcatatctctcgaatcacaaagattacagcagttcttgat
caagaaacttgggttgcaatagatatccctgatgaatttcaagccattgttgacttgttt
atttgttctgaggctgtgattgctgagggtgaggaggggtcccttcaattgaatcctgca
cagcaaacaaacacaattgacgggtcacgtgatgattctgcaaaagcagcttattctcaa
tcactttcaaggcagaattcagttgagtcctctgtagagcatgtcagacacgctaatacc
tcatcccagtccgggggaagtcaagaaaatacagtcgaatcttcgccacggcccataact
gaaaatgaccatcacagttccaagggacatgacaaatctccttcacaaaagcttttccat
aaaggtgttggttatcatatggtaaactgtggtttaattttgctaaagatgctctcagaa
tacactgatatcagtaataacttgccagcatcatcatctgaagttgttcagcgtgttgtg
gagattttaaaactttttaattcacggacttgtcaacttgttcttggtgctcgtgctata
caggtaactggtttgaaatcaataacggctaagcacttagctttggcaagccaggtggtt
agcttcttctacgctataataccagaaatcaggcgtattcttttcttgaaagtaccagaa
ccacgcaaggctttgttggtgtctgaaattgacagagtagcacaggattatagggtgcat
aaagatgcaatccacacaaagctagtgaatataatgaaggatcggttgccggtacatttg
cctgaaatggctaagagttggaatcaggaaagtgatgctcaaccaagtcttcatgcccga
cagctgactaaggaagttggggttcttcaacgtgtcttatctcgaactcttccagaggca
gatgttcacataattttcaggcaagtggttcaagttttccattcggaaatcacagcaacg
ttttcaaagatggatgtaaatagccctgaagcgaaggctagaatgtatcgtgatattcac
catattcttggatgtattcattcattacctactgatgactcaagtaaagatggagttaac
tctgggcaacttgatgaatttttggcacaaagatttgggacagacgcagttcactga
DBGET
integrated database retrieval system
