Amborella trichopoda: 18426518
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Entry
18426518 CDS
T02990
Name
(RefSeq) histidine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
atr
Amborella trichopoda
Pathway
atr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
18426518
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atr01007
]
18426518
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
18426518
Enzymes [BR:
atr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
18426518
Amino acid related enzymes [BR:
atr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
18426518
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
18426518
Prokaryotic type
18426518
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
18426518
NCBI-ProteinID:
XP_006833225
UniProt:
W1NS85
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MPTSASVLFCCPHLRLTLRLFNAFPFRFRSIRPLCASHASSFTSGDTAVYNSNSLDKGNS
IAHKRHGGLEAFSSPTVENVAIDVNPPRGTRDFPPEEMRLRSWLFQNFREVSALFAFEEV
DFPVLESEALFIRKAGEEISEQLYNFEDKGGRRVALRPELTPSLARLVIQKGKALPLPVK
WFTIGQCWRYERTTRGRRREHYQWNMDIIGVQGVAAEAELIFSIVILFKRLGITSSDVGF
KVSSRKVLQAVLQRYSIPEKLFGKVCIIIDKMDKIPKEEIEKELTMLGIPMEAINGLLQI
LSLKSVPELEEALGSDADAVDDLKDLFLLIEQYGCSNWIQFDASIVRGLAYYTGVVFEGF
DRGGKLRAICGGGRYDQLLSKLGGEDLPACGFGFGDAVIFELLKERGLLPELGPKVDYIV
LPLDPQLQGAAAMVASTLREKGRSVDLVLENKRLKWVFKHAERINASKLILVGDSEWQRG
MVRVKNLCSREESDLPLHELE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaagtgcttcagtgctattctgttgcccccatttgaggctcactttgagactc
ttcaacgccttccccttcaggtttcgcagtatccgccctctctgtgcttctcatgcttca
tcattcacttcaggggatactgccgtttataattcaaattcccttgataaagggaactca
attgcacacaaacgacatggcggtttggaagctttttcgtcaccgactgtagaaaatgtg
gccattgatgtcaatccaccacgggggacccgagatttccctccagaggagatgcgtctc
cgaagttggctcttccaaaactttagagaggtatctgctttgtttgcatttgaagaggtt
gatttcccagtccttgagtctgaagcgctgtttatcagaaaagcaggggaggaaatttca
gagcagctatataattttgaggataaaggtggtcgacgcgttgccttgaggcctgagctt
actccctctttggcacgacttgtgatacaaaaggggaaagctctaccacttccggtaaaa
tggtttacaataggacaatgctggcggtacgagcggacaactagaggaaggcgacgtgag
cactaccaatggaatatggacatcattggggttcagggagttgcagctgaagcagaactg
attttttcgattgtgatattgttcaagagattgggaatcacatcatcagatgtgggattc
aaggtttctagccgtaaggttctacaagcagtacttcaacgatatagtatacctgagaaa
ttatttgggaaagtatgcattattattgataagatggacaaaattcctaaagaggagatt
gagaaggaattgacaatgcttgggataccgatggaagctataaatggattacttcaaatc
ttatctctaaagtctgttcctgaactagaagaagcactcggatcagatgctgatgctgtt
gatgatctgaaagatctcttcttgctcattgaacagtatggttgttccaattggattcaa
tttgatgcttctattgtccgtggccttgcctattatactggggtcgtctttgagggcttt
gatagaggagggaagttaagagcaatttgtggtggtggtagatatgaccagttactctca
aaacttggtggtgaagaccttccagcttgtggctttggctttggagatgctgtgatattt
gaattgctgaaggagagagggctgttacccgagctgggtccaaaagttgattacatagtg
ctgcccttagatccacagctccaaggtgcagctgccatggttgcttctactctcagggag
aaaggccggagtgttgaccttgtcttggaaaacaaacgtttaaaatgggtgtttaagcat
gctgagcggatcaatgccagcaagctgatactcgttggagactctgagtggcaacgagga
atggttcgagtgaagaatctctgttcaagggaagaatctgacctcccacttcatgaattg
gaatga
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