Amborella trichopoda: 18426556
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Entry
18426556 CDS
T02990
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
atr
Amborella trichopoda
Pathway
atr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
18426556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18426556
03016 Transfer RNA biogenesis [BR:
atr03016
]
18426556
Enzymes [BR:
atr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
18426556
Messenger RNA biogenesis [BR:
atr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
18426556
Transfer RNA biogenesis [BR:
atr03016
]
Prokaryotic type
tRNA degradation factors
18426556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
DUF4072
Motif
Other DBs
NCBI-GeneID:
18426556
NCBI-ProteinID:
XP_006833262
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MAQARLVKFQKTLSHLSHYREGQRKPLGCGFCSVSEAVRRISVDEPSSWRLLPDMGDVYS
EEVEVGSRLITFETGKLARFAAGAVVLGIKDTKVLSTVVSAEGDGARDFLPLTVDYREKQ
YAQGKIPNTFMRREGAPKERELLCGRVIDRSIRPLFPKGFVHDVQVMANVLSSDGEQDPD
VMAANASSAALMISDIPWNGPIGVVRIGRIDGKFVVNPDMDELSLSDLNLVYSSALDKTL
MIEMQAREISNADLIDALHLAHAEAIKLIKPQRQLAAKVKNQKKSFKLFTIMDRTLEKIK
KLSETSIETVFSDPSYGKFERGKALSKIADDVKKILEEECDEESLKVLPKAIDTVRKMAV
RRRIFEKGLRVDGRSLDEVRPLFCESGSFPALHGSSIFSRGETQVLCTVTLGAPGDAQKL
DSLVGPPTKRFMLHYSFPPFSINEVGKQSGLNRREVGHGTLAEKALLALLPPEDNFPYSV
RINSEVMASDGSTSMATVCGGSLALMDAGVPLREHVAGVSVGLISEVDSSTGTIKDYRIL
TDILGLEDHLGDMDFKIAGTRKGVTAIQLDIKPAGIPLNIICESLDPALKARTHIINHME
RVTSEPRDRSAGNCPCLVTMKFSRESLWRLIGPQGSQLKKIEQETGARIAVNTDGGITIL
AKNQVTLEKTQEKVDFIVGREIEVGGIYKGVVVSIKEYGAFVEFNGGQQGLLHISELSHE
PVVRVSDAVSVGQELSLMCIGQDVRGNIKLSLKAINQPSPSQIQYLPLGDPESPPVNGAL
SSTSLESEKSPCQENENVIPSPLSSGSDGDEAADPTTLYSPPSVLIRSVEECNRQESLSR
LKSNNNKGSNSIPKNKKEKDTSPKSRASPLLQHISGILSSPVKNTKKSVPLSQERDKEET
TSRVQQISRDKQKPVGSTRAGATSLKLGDKCIATVQQIRVHGLVLQLESGIRGMYRFEAC
SKRDFEIGEELLVKCSSFSTKGIPVMSLSDGE
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggctcgtctggttaagtttcagaagacattgagccatctcagccattacagg
gaagggcaaagaaagcctttgggctgtggtttttgtagtgtttcagaggctgtaaggcgt
atatcagtggatgagccttcgtcatggcgtctcttgccagatatgggtgatgtttattct
gaagaagttgaagtcggctcccgtttaataacctttgaaactggaaagcttgcgagattt
gctgcaggtgctgttgtcttgggaattaaagacactaaagtgctttccactgtcgtctca
gctgagggagatggtgctcgggactttttgccactgactgttgattatcgggaaaagcaa
tatgcccaaggaaaaattcctaacacatttatgcgaagggaaggtgctccaaaggaacgt
gagctcttatgtggtcgtgtcattgatcggtccatccggccactatttcccaagggtttt
gttcatgacgtccaggtgatggcaaatgttctttcttccgatggtgagcaagatcctgat
gtgatggctgcaaatgcctcatctgctgccttgatgatatcagatatcccatggaatggt
cccattggtgttgtgcgtattggaaggatagatggaaaatttgttgttaatcctgacatg
gatgagcttagcttaagtgacctgaacttagtctactccagcgcactagataagacttta
atgatagagatgcaagcacgtgagatatcaaatgcagatttgattgacgctcttcattta
gcacatgctgaggccatcaaactgattaaacctcagagacagcttgctgcaaaagtcaag
aatcaaaaaaagagttttaaattgttcactataatggataggacactcgagaaaattaag
aagttgtctgaaacttcgattgagactgtcttctcagatccatcatatggcaagtttgaa
cgggggaaagccttgagtaaaattgcggatgatgtcaaaaagatattggaagaagagtgt
gatgaggaaagcttaaaagtgctcccgaaggccattgacacagtcaggaaaatggctgtt
cgtagaaggatttttgagaaagggcttagagtagatgggaggagtttggatgaagttagg
cctttgttctgtgaatctggttcttttccagctttgcatggatcctcgatcttttcacgt
ggagaaacacaggtcctgtgcacagtgacgctaggagcacctggagatgcccagaaattg
gattccctggttggccctcctaccaagcgcttcatgcttcattatagttttccaccattc
tcaattaatgaggtcggcaaacaaagtggcctgaatagacgtgaagttgggcatggcacg
ctagcagagaaagctttgcttgcattattacctcctgaggataatttcccatacagtgta
cgcatcaattctgaagtcatggcttctgatggatcaacgtcgatggccacagtttgtgga
ggcagcctagctttgatggatgctggtgtcccactcagggagcatgttgcaggagtttct
gtggggcttattagtgaggtggattcgtctactggaactataaaggattaccgtatattg
actgatattttgggtctagaagatcatctgggtgacatggacttcaaaattgctggtaca
agaaaaggtgtgactgctatacagttggacataaaacctgctggaatccctttaaatatc
atctgcgaaagcttagaccctgctcttaaagctcggacccacatcattaatcacatggag
agggtgactagcgaaccacgtgaccgttcagctggaaattgtccatgcttagttactatg
aagttcagtcgggaatccctttggcgattgattggtcctcaaggttcacaactcaaaaag
attgagcaggaaacaggtgctcggatcgctgtcaatactgatggaggaattaccatattg
gcgaagaatcaagtgactttggaaaagacacaggaaaaggttgatttcattgttgggcgc
gaaattgaggttggtgggatttataaaggtgttgtagtttcaatcaaagagtatggggct
tttgtggagtttaatggaggccaacaagggttgttacatatttctgagttatcacatgag
ccggtagttcgggtctctgatgcggtctctgtagggcaagagctatcattaatgtgcatt
gggcaagatgtcaggggaaacattaaactatcactaaaggctattaaccaaccttcccca
tctcaaattcagtatttgccacttggtgatcctgagtcacctcctgtgaacggtgcacta
agctctacatcattagaaagtgaaaagagcccatgtcaagagaatgagaacgtcattccc
agtcccttatcatctggcagtgatggcgatgaagcggctgatcctactacgttgtattcc
ccaccttcagtattgattcgaagtgtcgaagagtgcaataggcaagaatctctttctcgt
ctgaaatcaaataataataagggttcaaattccattcctaaaaacaagaaagagaaagat
accagccccaaatcaagggcttctccactacttcagcatataagtgggattctctcttca
cctgtgaaaaacacaaagaaatcagtacctctttcacaggagcgcgataaagaagagact
acttctagggttcagcaaataagcagagacaagcaaaaaccagtgggtagcactcgtgct
ggtgcaacttcactgaagcttggagataaatgcattgctaccgttcaacagattcgtgtg
catggtcttgttctccagttggaaagtggtattcgtggtatgtacaggtttgaggcctgt
tccaagagggactttgaaattggagaggagcttctggtcaaatgctcaagcttttcgact
aagggtatcccagtgatgtctttatcagatggggagtag
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