Amborella trichopoda: 18426787
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Entry
18426787 CDS
T02990
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18426787
Membrane trafficking [BR:
atr04131
]
Protein recycling
Others
EARP complex
18426787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
18426787
NCBI-ProteinID:
XP_006833490
UniProt:
W1NST3
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MDLSKVGEKLLNSVRSARSLGLLPSISADRPEVPVRAVQAAAIARALAILPPHQRLTLPS
NSEDLVFIYGIKPHGQTTESLEEEFYEEDFDPVRHVLQHIPLEENGLSYFETKATLRLAQ
LDGIAERLSRHVMEHHEEMVKGMQLVMELEQDLKVANVICMNGRRHLGSSVHEVSRDLVV
TSNARRKQALLDLLPILTQLHHTLEMQGALNTHVEDGSYRRAFQVLSEYLQLLDSHAELS
AVQEMSRGVEAWLGKTLQQLDSLLLGVCQDFKEKSYLTVVDAYALIGDTAGLTEKIQSFF
MQEVLSETHSALKDIIHEVSDLPETHSRSRHTYSDLCLQIPESKFRQCLLRTLEVLFNLM
CSYYDIMAFQLPGKDSEAAGDGPDDVPWIGNRSTQNGDSGCSEGVCCKDSLLQVACDDGM
TADVQRSAHEAGDDSPIASSSTSPCDQLKKDAVLFISQALQRGRKNLWQLTTSRVSVLLS
CDAVYSTNTHQFLRNYEDLNTFILAGEAFCGTEAIDFRQRLKTVCRSYFGAFHRQSIDAL
RMVLEKETWQQIPPDTMQVVSLEGLVGDGAPLIVPSDGIARKMLVQYTENMPNQVEIHDI
KDGFSLWVEKGNPFTARISGSNRDCGTGTLQSTGPGISDVIEGVSSHVNGDASVVDDENE
DLLADFIDEDSQLPSRISRPAVATTSSINLEDDEIRAQTGSSLSLLRLMDKYARLMQKLQ
IVNVDFFEGICQLFEVYFHSLFKTFGQRDLCINGVGTMDSIPPRLRNAFMRITQDLYDHR
TKSQAVSVSSASPGAISNSVIQTEVTPVNPSTVHSGHIPSTSFGLKERCIGPETLSHVAQ
ILYRSKAHLQSMLQQNNGAIVEDFYRNMVDSVLDLVEHIHRTTARLLLNINGYVDRVANA
KWEFKELGLEHNGYVDLLLGEFKHYKMRLAHAGIRKEIQDVLLEYGLENVAETLIEGLSR
VKRCTNEGRALMSLDLQVLINGLQHFVSINVKPKMHIVESFIKAYYLPETEYVHWARSHP
EYSKNQVIGLVNLVASMNNWKRKTRLEMLEKIEAINS
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggatctgtctaaggttggagagaagcttctcaattctgtgagatctgctagatccttg
ggccttctcccttccatctcagcggatcgccctgaggtcccagttcgggcagtacaagct
gctgctattgcacgagctcttgccatccttcctcctcatcaacggcttactcttccatcg
aactctgaagatttagtttttatttatggaatcaagccacatggtcaaacaactgaaagt
ttagaggaagaattttatgaggaggattttgatccagttaggcatgtccttcaacatatt
ccattggaagaaaatggtctaagctactttgagacgaaggccactttgagattagcacaa
ctcgatggcatagcagagagattgtctcgccatgttatggagcaccatgaagaaatggta
aagggaatgcagctagtaatggagcttgagcaagacttgaaggttgcaaatgtcatatgc
atgaatggcaggaggcatctgggttcatcagtgcatgaggtatcacgggaccttgtggtg
acatcaaacgcaagacgaaaacaggctcttctggatttgcttcctattcttacacaactt
catcatacactcgagatgcaaggggcacttaacacacatgtggaagatggaagttatcgt
cgggcgtttcaggtgctgtcagaatatctacagcttcttgacagtcatgcagaactttct
gctgtacaagaaatgagccgtggtgtagaggcctggcttggaaagactctgcagcaattg
gattctctccttttgggggtttgtcaagattttaaagaaaaaagctacttgacagttgtc
gatgcttatgccttaattggtgacactgctggtttgactgaaaagatacaaagttttttc
atgcaagaggttctatcagaaacccattcggcactgaaggatatcattcatgaggtttct
gatcttccagaaacacattctaggagtaggcatacctacagtgatctctgtcttcagata
ccggaatcaaaatttaggcagtgtttgttaaggacattggaagtactatttaatttgatg
tgctcatattatgacataatggcattccagcttcctggaaaggattcagaagcagcgggt
gatggaccagatgatgtaccttggataggcaatagaagtacgcagaatggtgactcaggg
tgttcagaaggtgtttgttgtaaggattctttattgcaggttgcatgtgatgatgggatg
actgccgatgtccagagatctgctcacgaagcgggtgatgactctccaattgcttccagc
agcacttccccttgtgatcaattgaagaaggatgcagttcttttcatttcacaagcattg
caaagaggtcgaaagaatctttggcagctcacaacaagtcgtgtttcagttttgctctca
tgtgatgcagtttattcaacgaacacacaccaattcttgaggaattacgaggatctaaac
acattcatcttggctggtgaggcattttgtggcactgaagctattgattttaggcagcga
ttaaagactgtctgcagaagttattttggagcatttcatcggcaaagtattgatgcactt
aggatggttctggagaaggagacctggcaacaaattccaccagatacaatgcaagtcgta
agtttggaaggtcttgttggagatggggcgccattaattgtcccatctgatggtattgct
cggaagatgttagttcaatatacagagaatatgcctaaccaagttgaaattcatgacata
aaggacggtttttccctatgggtagagaaaggaaatcctttcactgccaggatttcaggt
agtaacagagattgtggaactggaaccttgcagagcactggtccagggatttctgatgta
attgagggtgtctcatctcatgtaaatggtgatgcttctgttgtggatgatgaaaacgag
gatcttctagctgattttattgatgaagacagtcagctgccaagccgtatttctagacca
gcagttgcaacgacatcctctataaacttggaagatgatgaaatcagagctcaaacaggg
tcctcactgtctcttttaaggttgatggacaagtatgcaaggcttatgcagaaattacag
atagttaatgtagatttttttgaggggatttgtcagctgttcgaggtttactttcattct
ctgtttaagacatttggccaacgagacctgtgtattaatggagtaggcaccatggattct
attcctcctcgattaaggaatgctttcatgagaataacccaagatttatatgatcatcga
acaaagagccaagctgtatcggtctcttcagcttcaccaggagctattagcaactccgtc
atacaaacagaagtaactccagtaaacccatccaccgtacactctggtcatataccaagt
acatcttttgggttaaaggaaagatgtattggtccagagacactctcccatgttgctcaa
atattatatcgatctaaggcacatctccaatcaatgctgcaacaaaacaatggagcaatt
gttgaagatttctaccgcaacatggtggattctgtgcttgatctcgtggagcacatacac
agaacaactgccaggttgctgctaaatattaatggatatgttgatcgagttgcgaatgcc
aaatgggaattcaaagagcttggactagagcataatgggtacgttgatttattactcgga
gaatttaagcactataaaatgaggttagctcatgctggcatccgcaaagagattcaagat
gtcctattagaatacggacttgaaaatgttgcagaaactctcattgaaggtttatcacga
gtgaagagatgtacaaatgaagggcgagcactaatgtcgctagatcttcaggtattgatt
aacggacttcagcattttgtttctatcaatgtgaaaccaaagatgcacattgtcgaatca
tttattaaggcctattatctccctgaaactgagtatgtacactgggcacggtcccatccg
gaatatagtaaaaatcaagtcataggtctggtcaatctggttgcatcaatgaataactgg
aaacggaagacaagattggagatgctggaaaagatagaagccatcaactcttaa
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integrated database retrieval system
