Amborella trichopoda: 18426999
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Entry
18426999 CDS
T02990
Name
(RefSeq) ABC transporter E family member 2
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atr03009
]
18426999
Ribosome biogenesis [BR:
atr03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
18426999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4_RLI
AAA_21
Fer4
Fer4_6
RsgA_GTPase
AAA_22
AAA
nSTAND3
NACHT
AAA_16
Fer4_21
AAA_29
TsaE
Rad17
Fer4_2
AAA_23
VapE-like_dom
Fer4_10
SRP54
ORC-CDC6-like
AAA_30
AAA_28
Fer4_4
AAA_24
Fer4_9
NPHP3_N
Fer4_7
Fer4_16
AAA_19
Fer4_3
Motif
Other DBs
NCBI-GeneID:
18426999
NCBI-ProteinID:
XP_006836109
UniProt:
W1NTU5
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MADQRLNRIAIVNADRCKPKECRQECKKSCPVVRTGKLCIEVSPASKIAYISEELCIGCG
ICVKKCPFDAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTA
LKVLAGRLKPNLGRFRNPPDWEEILTYFRGSELQDYFIRLLEDNLKPAIKPQYVDHIPKA
ARGTVREVLAQKDERGMMTEICCDLELNEVMDHDIGDLSGGELQRFAIAVVAVQNADIYM
FDEPSSYLDVKQRIKAAQVIRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGVYGVV
TLPFSVREGINIFLAGFVPTENLRFRDNHLTFKIASNHQENAEEMKSYARHRYPTMSKTQ
GKFKLTVIEGEFTDSQIIVMLGENGTGKTTFIRMLAGHLRADEVDGGLGVEVPEFNVSYK
PQKISPKYPSKVRHLLHQKIQDSYMHPQFMTDVMKPLQIEQLMNQEVVNLSGGELQRVAL
CLCLGKPADIYLIDEPSAYLDSEQRIVASKVIKSFILHSKKTAFVVEHDFIMATYLADKV
IVYAGKPSVECTANAPEELLTGMNRFLSHLDVTLRRDTTSYRPRINKLDSTKDREQKAAG
TYYYN
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcagagattgaatcgaattgctatcgtcaatgcagatcgatgcaagccgaaa
gagtgtcggcaagagtgtaaaaagagctgccctgttgttagaactggtaaactttgtatc
gaggtttcccctgcctcaaagattgcttatatttcagaagagttatgcattggatgtggt
atttgcgttaagaaatgcccatttgatgccatccagataatcaatttgcccaaagatttg
gacaaagatacaactcatcgatacggcccaaacacattcaagttgcataggttgccggtt
ccaaggccagggcaagtccttgggctggttgggacaaatggtattgggaaatcaactgct
cttaaagtgctggctgggagattgaaacctaatttgggacgctttaggaatcctcctgat
tgggaggagatattgacatatttcagggggtcagagcttcaagattattttattcgtctt
ttagaagacaatctaaagcctgccatcaagcctcagtatgttgatcacataccaaaggca
gcacgggggactgtccgtgaggttcttgctcagaaagatgagaggggaatgatgactgaa
atttgttgtgacctagagttgaatgaggttatggatcatgacattggtgacttatctggt
ggagaattgcagcggtttgctattgctgttgttgcagttcagaatgctgacatatatatg
tttgacgagccatccagttatcttgacgtaaagcaaaggataaaagctgcgcaagtgatt
cgatctttgctcaggcccaacagctatgtaatcgtagtggaacatgaccttagtgttctg
gattacttatcggacttcatttgctgcctttatggaaagcctggagtttatggagttgta
acacttccattttctgttagagaaggaattaatatctttttagctgggtttgttccgact
gagaaccttcggttcagggataaccacctgacattcaagattgcgagcaatcatcaagaa
aatgcagaggagatgaagtcctatgcccgacatagatacccaacaatgagtaaaactcag
ggtaaattcaagcttacagtaattgagggtgaatttactgattctcagattattgtaatg
ttaggggagaatgggactgggaagacaacgtttatccgcatgctggctggtcacttgaga
gccgatgaagtggatggaggtttgggtgtggaagtacctgaattcaatgtctcttacaag
ccccagaagattagtcccaaatacccttcaaaagtcagacatctactgcatcaaaagatt
caggattcctatatgcatcctcagttcatgactgatgtcatgaaaccccttcaaattgag
caattaatgaatcaagaagttgtaaatctatctggtggagagttgcagagggtggcattg
tgcctatgccttggcaagcctgctgacatctatctgattgatgagccaagtgcttatctg
gattcagagcagcgtattgtggcctcaaaggttatcaagagttttattcttcattccaag
aaaactgcttttgttgtggagcacgatttcataatggcgacttacctggccgacaaagta
attgtatatgcggggaaaccatctgtagaatgcactgctaatgctcctgaagaattgttg
acaggaatgaaccgattcctatcacatctggatgttacattgaggcgagatacaaccagc
tataggcctcgaatcaacaaattggactccacaaaggacagggaacagaaagcagctggg
acctattactataattaa
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