KEGG   Amborella trichopoda: 18427027
Entry
18427027          CDS       T02990                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
atr  Amborella trichopoda
Pathway
atr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18427027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atr03019]
    18427027
   03041 Spliceosome [BR:atr03041]
    18427027
Messenger RNA biogenesis [BR:atr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     18427027
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     18427027
Spliceosome [BR:atr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    18427027
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 NMB0537_N
Other DBs
NCBI-GeneID: 18427027
NCBI-ProteinID: XP_006836153
UniProt: W1NQ21
LinkDB
Position
Unknown
AA seq 481 aa
MGKKRKTEIKTEVEVEVEAEAEANNDEAMFDEEIEGQQQEPENQNEEAPEEPANINNHEE
EEEEEEETDSESLTRLLEPFSKDQLIELLRQAALQHSDVFDSINKVADVDPAHRKIFVHG
LGWDTTAEILISTFKKYGEIEDCNAVADKHSGKSKGYGFILFKHRSGARKALKQPQKRIG
NRMTACQLASAGPVPQQPPVSEYTMRKIYVSNVSSDIDPQRLYTFFSKYGEIEEGPLGLD
KQTGKPRGFSLFVYKSLESARKALEDPHKNFEGHILHCQKAIDGPKPNKPTHHAGQAHHH
PHHQNQHHNPHYPQHHADNMQMMNQVPAHGASHGGLMAPSQGSMPFNQAAGGLNPALGQA
LNALLASQGAGFGLQNVLASLNPMAAAAALNQTGLSPNVNQSVPAAGSMVNNASHGAGMG
GYGGQGGMGSGNMMGGYGSQGAVQGVGVGGYQNAQMGQPGSGVRAQQGVGAMGGVTPYIG
H
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggggaagaagcgaaagaccgagatcaaaaccgaggtcgaggtggaggtcgaggccgag
gccgaggccaacaacgacgaagccatgttcgatgaagagatcgaaggccagcaacaagag
ccggagaaccagaacgaggaggcaccagaagaaccagcaaacataaacaatcatgaagag
gaggaggaagaagaggaggaaaccgattccgagtccctcaccaggctcctcgaacccttc
tcgaaagaccagctcatcgagctcctccgccaagctgctctccagcattccgacgtcttt
gattcgatcaacaaagttgcggatgttgatcccgctcacaggaagatatttgttcacggc
cttggatgggacactaccgctgaaatcctgatttccaccttcaagaagtacggagaaatt
gaggattgcaacgcagttgcagacaagcactctggtaaatcgaagggctatggtttcatt
ctcttcaagcatcgatctggagctcgaaaagcccttaagcagccacagaagaggattggt
aatcgaatgactgcttgtcaactggcctctgctggtccggttcctcaacaaccccctgtc
tctgaatatacgatgcgaaaaatctatgtaagcaatgtgtcttctgatattgatcctcaa
aggctttataccttcttctcaaagtatggagagatcgaagaaggcccgttagggttggat
aagcaaactggtaagccaagggggttcagtctctttgtctacaaatccctggaaagcgcg
agaaaagccctagaagacccacataagaactttgaaggccacattctccactgccaaaag
gccatcgatgggccgaagccaaacaaaccaacccaccacgcaggtcaagcccaccatcac
ccccaccaccaaaaccaacatcataacccacactatccccaacaccacgccgataacatg
cagatgatgaaccaagtaccagctcacggtgcaagccatggtgggctcatggcaccaagc
caaggctcgatgccatttaaccaggcagctggtggcctcaacccagctctgggtcaagcc
ctaaatgccctgttagcctcacaaggtgcagggtttgggctccaaaatgttcttgctagt
cttaacccaatggctgctgctgccgcattgaaccaaactgggttgtcacccaatgtgaac
caaagtgttccggctgctggttcgatggtgaacaatgcaagccatggggctggaatgggg
ggatatgggggtcagggtggcatgggcagtgggaatatgatgggtggctatgggtctcag
ggagcagttcaaggggtcggcgttggtgggtatcagaatgctcagatgggtcagccaggt
tctggagtgagggctcagcagggagtcggagcgatggggggtgttacgccttatattggt
cattag

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