Amborella trichopoda: 18427056
Help
Entry
18427056 CDS
T02990
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atr03021
]
18427056
Transcription machinery [BR:
atr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
18427056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
CTK3
PspA_IM30
Tropomyosin
CREPT
Nuf2_DHR10-like
Motif
Other DBs
NCBI-GeneID:
18427056
NCBI-ProteinID:
XP_011620696
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MQMTSDCDDRMNNVFNNQILAEKLSKLNNSQQSIETLSHWCIFHRKKAKQVVETWEKLFN
SSQKEQRIAFLYLANDILQNSRRKGSEFVNEFWKVLPRALKDVLENNGEPGKKVVTRLMD
IWEERKVFGSRARSLKAQMLGKDPPPLPENNGKSSNSNSIKIVKKDTNFLRIKLAVGGMP
EKILSSFHSVHDDHVKEDNALNSCKASVHHMGKLEKDAETACSRGDPQGATLANELDEQE
SNLRQCIEVLKSIEANRASLIIQLKEALQEQESQLEQVRNQLKVAQAQIDQASRIRHRLA
TAHLTTSSDLSPPPTNPNPTPILNLTPPLSNSNTKSASIPEPPKKSAAELAAEMAAKLTA
STSSAQIFSSVLSSLAAEEAASSQKSGSFFGQEGTPENWNESPLEKKPKLEKPMPVFTQI
TQQITQGLAFPQPHMQQYVQPSGGLMMGLAYSYGPGGPPLPPPPPLPVHAMMGPRSNGPV
HGPGPGPATQQMMLPGFYSNPGTGFYMQGNNPPPVPR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgacttcggattgtgacgacaggatgaataacgtttttaacaatcaaatatta
gctgagaagctctccaagctcaataactctcagcaaagcatagaaacattatctcattgg
tgtatattccatcgaaagaaagcaaaacaggtagttgagacgtgggagaaactttttaat
agcagtcagaaagagcagcgcattgcctttctttatctggcaaatgacattctacagaac
agcaggcgaaaagggagtgaatttgtgaatgaattctggaaggtcctccctagagccctc
aaggatgtcttggagaataatggtgaacctgggaaaaaagtggtcactagactgatggat
atttgggaagaaaggaaagtatttggatctcgtgcacggagcctcaaagcacaaatgctt
ggaaaagatcctccacctttaccagagaacaatggaaagagctcaaattcgaattctatc
aaaattgtgaagaaggatacaaacttcttaagaataaaattggctgttggaggtatgcca
gaaaaaatattgtcttcatttcattctgtgcatgacgatcatgttaaggaagataatgct
ttaaacagctgcaaggcttctgttcaccacatggggaagttggaaaaagatgctgagact
gcctgttcacgtggagatccacagggagccacgttggcaaatgaactagatgagcaggaa
agcaatttgagacaatgcattgaagtacttaaaagtattgaagctaatagagcttctctg
ataatccaactgaaggaagcactccaggaacaggaatcccaactggagcaagttcgtaat
caactaaaggtagcacaggcccaaattgaccaagccagcagaatccggcatcgcctcgcc
accgcacacctcaccacctcatcagacctatcaccaccccccaccaaccccaacccaaca
ccaatcctgaacctgacccccccactttctaactcaaacactaaaagcgcatcaattcct
gaaccccccaagaaatcagctgctgaattagctgccgaaatggccgccaagctcactgcc
tcaacctcatcagcccaaatattctcctctgttttatcttcccttgcagctgaagaagct
gcctcttcccaaaaatctgggtcattttttgggcaagaaggcacacctgaaaattggaat
gagagcccattagagaagaagccaaagcttgagaaaccaatgcccgtctttactcaaata
acccagcaaataactcaaggcctggcctttccgcaacctcatatgcaacaatatgtgcag
cctagtggagggctaatgatgggcttggcttatagttatgggcctggaggcccaccattg
cccccacctcctccattgcctgttcatgctatgatgggtcctaggtccaatggacctgtg
catgggcctgggcctgggccagcaacgcaacaaatgatgctcccagggttttactccaat
ccagggaccggattctacatgcaggggaataatccaccacctgtacccaggtag
DBGET
integrated database retrieval system
